RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TMEM251Q8N6I4 163 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 RFWD2Q8NHY2 731 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 RELTQ969Z4 430 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 TRNT1Q96Q11 434 aaKnown RBP9.8□□□□□ -0.84
UBR4-208ENST00000459947 OR51I1Q9H343 314 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 LDAHQ9H6V9 325 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 P2RX2Q9UBL9 471 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NPIPA1Q9UND3 350 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 NTNG1Q9Y2I2 539 aa9.8□□□□□ -0.84
UBR4-208ENST00000459947 FADS1O60427 444 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 EIF4E2O60573 245 aaKnown RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 GABRA1P14867 456 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 FOXO1Q12778 655 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 HEPHL1Q6MZM0 1159 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 SPATA21Q7Z572 469 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 CPLX4Q7Z7G2 160 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 SLC16A11Q8NCK7 471 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 NODALQ96S42 347 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 DKKL1Q9UK85 242 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 C15orf38-AP3S2A0A0A6YYH1 394 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 GMNCA6NCL1 334 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ZNF354AO60765 605 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 STSP08842 583 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 PTGER1P34995 402 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 DGKQP52824 942 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 EEF1A1P68104 462 aaKnown RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 PRAMEF20Q5VT98 475 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 EEF1A1P5Q5VTE0 462 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 LRRC74BQ6ZQY2 392 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ARPINQ7Z6K5 226 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ZNF440Q8IYI8 595 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 OR5M3Q8NGP4 307 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 CDS1Q92903 461 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 DEPPQ9NTK1 212 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 GID8Q9NWU2 228 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 SLC35A3Q9Y2D2 325 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ZNF835Q9Y2P0 537 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 TRGV5A0A0B4J1U4 118 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 FIGNL2A6NMB9 653 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ICOSLGO75144 302 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 PTGS2P35354 604 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 DSCR4P56555 118 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 EEFSECP57772 596 aaKnown RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 CYLC2Q14093 348 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 WLSQ5T9L3 541 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ENPP6Q6UWR7 440 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 RPTNQ6XPR3 784 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 TRILQ7L0X0 811 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 FAM57AQ8TBR7 257 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 ZFP90Q8TF47 636 aa9.79□□□□□ -0.84
UBR4-208ENST00000459947 EFHD2Q96C19 240 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 TP63Q9H3D4 680 aaPredicted RBP9.79□□□□□ -0.84
UBR4-208ENST00000459947 NDUFB5O43674 189 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 WDR1O75083 606 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 UNC5CO95185 931 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 UQCRBP14927 111 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 GPR85P60893 370 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 PHC1P78364 1004 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 PRR30Q53SZ7 412 aaPredicted RBP9.78□□□□□ -0.84
UBR4-208ENST00000459947 AAGABQ6PD74 315 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 ANKRD46Q86W74 232 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 ZNF619Q8N2I2 560 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 BHLHE22Q8NFJ8 381 aaPredicted RBP9.78□□□□□ -0.84
UBR4-208ENST00000459947 MARK4Q96L34 752 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 JSRP1Q96MG2 331 aaPredicted RBP9.78□□□□□ -0.84
UBR4-208ENST00000459947 ZNF350Q9GZX5 532 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 TPT1P8Q9HAU6 139 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 CCDC167Q9P0B6 97 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 RALYQ9UKM9 306 aaKnown RBP9.78□□□□□ -0.84
UBR4-208ENST00000459947 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 GXYLT2A0PJZ3 443 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 LRRC3CA6NJW4 275 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 EFNA1P20827 205 aaPredicted RBP9.78□□□□□ -0.84
UBR4-208ENST00000459947 LSP1P33241 339 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 ADH7P40394 386 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 CRISP3P54108 245 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 DSTNP60981 165 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 PMP22Q01453 160 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 ZNF141Q15928 474 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 GRAMD1BQ3KR37 738 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 FLYWCH1Q4VC44 716 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 NHSL2Q5HYW2 709 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 GTF2H4Q92759 462 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 C16orf58Q96GQ5 468 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 TRIM4Q9C037 500 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 SAP130Q9H0E3 1048 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 DTNAQ9Y4J8 743 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 BMP2P12643 396 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 ZNF17P17021 662 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 CHMP24386 653 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 MST1P26927 711 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 PRDX6P30041 224 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 DCTP40126 519 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 GNGT1P63211 74 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 FADS6Q8N9I5 356 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 OR5AK3PQ8NH89 298 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 BBS10Q8TAM1 723 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 NEIL3Q8TAT5 605 aa9.78□□□□□ -0.84
UBR4-208ENST00000459947 C10orf82Q8WW14 230 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms