RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 VSNL1P62760 191 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 STX5Q13190 355 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 VPS26BQ4G0F5 336 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 ARL13AQ5H913 290 aaPredicted RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 RAET1LQ5VY80 246 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 GRAMD2AQ8IUY3 354 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 CEP70Q8NHQ1 597 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 GPR151Q8TDV0 419 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 FAM222BQ8WU58 562 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 TWIST2Q8WVJ9 160 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 ZNF764Q96H86 408 aaPredicted RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 FCRL1Q96LA6 429 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 MECRQ9BV79 373 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 SFXN3Q9BWM7 321 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 TBL1XR1Q9BZK7 514 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 ROPN1BQ9BZX4 212 aaPredicted RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 ROPN1Q9HAT0 212 aaPredicted RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 FAM120CQ9NX05 1096 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 MED11Q9P086 117 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 SLC17A7Q9P2U7 560 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 BAIAP2L1Q9UHR4 511 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 TMEM114B3SHH9 223 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 TBX19O60806 448 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 PEPDP12955 493 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 HK1P19367 917 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 CPA2P48052 419 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 CLDN18P56856 261 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 FOXF2Q12947 444 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 GANABQ14697 944 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 EMBQ6PCB8 327 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 P4HA3Q7Z4N8 544 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 ADGRE4PQ86SQ3 457 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 MARCH3Q86UD3 253 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 UBQLNLQ8IYU4 475 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 FADS6Q8N9I5 356 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 AGR3Q8TD06 166 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 DUSP19Q8WTR2 217 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 SLC9A6Q92581 669 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 CLEC4MQ9H2X3 399 aaPredicted RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 FLRT3Q9NZU0 649 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 C17orf51A8MQB3 221 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 TMEM233B4DJY2 109 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 B4DXG7 233 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 LINC01387J3KSC0 135 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 PIP5K1BO14986 540 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 UTS2O95399 124 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 MAPK1P28482 360 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 DNAJA1P31689 397 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 SERPINB5P36952 375 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 EEFSECP57772 596 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 EEF1A1P68104 462 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 SORDQ00796 357 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 C17orf67Q0P5P2 114 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 PDE7AQ13946 482 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 TESK1Q15569 626 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 BCL2A1Q16548 175 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 ZNF385BQ569K4 471 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 EEF1A1P5Q5VTE0 462 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 FBXW10Q5XX13 1052 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 ZCCHC23Q6ZST2 131 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 LUZP2Q86TE4 346 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 GCNT2Q8N0V5 402 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 CDRT4Q8N9R6 151 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 OR2M3Q8NG83 312 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 PIK3R3Q92569 461 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 NRGNQ92686 78 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 MTERF3Q96E29 417 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 RMND5BQ96G75 393 aaPredicted RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 PPP3R2Q96LZ3 170 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 G6PC3Q9BUM1 346 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 RBM24Q9BX46 236 aaKnown RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 RASSF1Q9NS23 344 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 ACSS1Q9NUB1 689 aaPredicted RBP11.67□□□□□ -0.54
CHD3-206ENST00000452447 JKAMPQ9P055 326 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 EDARQ9UNE0 448 aa11.67□□□□□ -0.54
CHD3-206ENST00000452447 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
CHD3-206ENST00000452447 HRNRQ86YZ3 2850 aaPredicted RBP11.66□□□□□ -0.54
CHD3-206ENST00000452447 GXYLT2A0PJZ3 443 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 A6NNC1 897 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 ANGPTL1O95841 491 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 BCKDHAP12694 445 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 CD1EP15812 388 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 HPCAL1P37235 193 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 RPL3P39023 403 aaKnown RBP11.66□□□□□ -0.54
CHD3-206ENST00000452447 DIO3P55073 304 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
CHD3-206ENST00000452447 PRR5P85299 388 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms