RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 FADS6Q8N9I5 356 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 FBXO30Q8TB52 745 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 ZNF675Q8TD23 568 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 RNF138Q8WVD3 245 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 ZFP3Q96NJ6 502 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 KLHDC3Q9BQ90 382 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 FAIM2Q9BWQ8 316 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 BRF2Q9HAW0 419 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 SENP1Q9P0U3 644 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 VPS29Q9UBQ0 182 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 TRPS1Q9UHF7 1281 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 DMGDHQ9UI17 866 aaKnown RBP9.14□□□□□ -0.95
LINC01004-202ENST00000450686 ADAM21Q9UKJ8 722 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 SNX6Q9UNH7 406 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 OR10H1Q9Y4A9 318 aa9.14□□□□□ -0.95
LINC01004-202ENST00000450686 FREM1Q5H8C1 2179 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 GXYLT2A0PJZ3 443 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 ARHGEF9O43307 516 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 FADS1O60427 444 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 DLX3O60479 287 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 AQP8O94778 261 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 SUPT7LO94864 414 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 NTN1O95631 604 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CGAP01215 116 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 IGKV1D-16P01601 117 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CRYGSP22914 178 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CHMP24386 653 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 HMOX2P30519 316 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 TIA1P31483 386 aaKnown RBP eCLIP9.13□□□□□ -0.953e-6■■□□□ 12.5
LINC01004-202ENST00000450686 PHBP35232 272 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 FOXA1P55317 472 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 DSCR4P56555 118 aaPredicted RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 PSG6Q00889 435 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 RELBQ01201 579 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 GAB1Q13480 694 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 EFR3AQ14156 821 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 ACKR1Q16570 336 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 METTL2BQ6P1Q9 378 aaKnown RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 GPRIN3Q6ZVF9 776 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CHMP1BQ7LBR1 199 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 FAM9CQ8IZT9 166 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CEP112Q8N8E3 955 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 GATSQ8NAP1 163 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 LRRN4CLQ8ND94 238 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 DUSP19Q8WTR2 217 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 OTUB1Q96FW1 271 aaPredicted RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 BBS4Q96RK4 519 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 MRPL57Q9BQC6 102 aaKnown RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 MRPL46Q9H2W6 279 aaKnown RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 SLC35C2Q9NQQ7 365 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 TMEM216Q9P0N5 145 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 MCM8Q9UJA3 840 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 PSME2Q9UL46 239 aa9.13□□□□□ -0.95
LINC01004-202ENST00000450686 POLR3HQ9Y535 204 aaPredicted RBP9.13□□□□□ -0.95
LINC01004-202ENST00000450686 CADP27708 2225 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 GOLGA8RI6L899 631 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 PEPDP12955 493 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 GCAP28676 217 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ECHS1P30084 290 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 PTH2RP49190 550 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 NCBP2P52298 156 aaKnown RBP eCLIP9.12□□□□□ -0.954e-10■■■■□ 19.9
LINC01004-202ENST00000450686 C2orf80Q0P641 193 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 TSNAXIP1Q2TAA8 658 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ZNF678Q5SXM1 525 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ANKRD26P1Q6NSI1 321 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 APOOLQ6UXV4 268 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
LINC01004-202ENST00000450686 METTL6Q8TCB7 284 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 IFT81Q8WYA0 676 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 PIK3R3Q92569 461 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 C1GALT1C1Q96EU7 318 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ACBD3Q9H3P7 528 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 TMEM185BQ9H7F4 350 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 RNF122Q9H9V4 155 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 TNFRSF12AQ9NP84 129 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 EQTNQ9NQ60 294 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ZNF226Q9NYT6 803 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 TMCO1Q9UM00 188 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 VDAC3Q9Y277 283 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 PTGDR2Q9Y5Y4 395 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC01004-202ENST00000450686 CR1P17927 2039 aa9.12□□□□□ -0.95
LINC01004-202ENST00000450686 ABCA1O95477 2261 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.11□□□□□ -0.95
LINC01004-202ENST00000450686 MYO1GB0I1T2 1018 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 C16orf97H3BN30 126 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 UBFD1O14562 309 aaKnown RBP9.11□□□□□ -0.95
LINC01004-202ENST00000450686 EIF1AYO14602 144 aaKnown RBP9.11□□□□□ -0.95
LINC01004-202ENST00000450686 EMC8O43402 210 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 PLOD3O60568 738 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 GOSR1O95249 250 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 CNOT4O95628 575 aaKnown RBP9.11□□□□□ -0.95
LINC01004-202ENST00000450686 KRT6AP02538 564 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 KRT6BP04259 564 aa9.11□□□□□ -0.95
LINC01004-202ENST00000450686 ANXA4P09525 319 aaPredicted RBP9.11□□□□□ -0.95
LINC01004-202ENST00000450686 EFNA1P20827 205 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms