RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CCDC34Q96HJ3 373 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 SLC52A3Q9NQ40 469 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 PLSCR4Q9NRQ2 329 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 RNF7Q9UBF6 113 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 RABL2AQ9UBK7 228 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 PCYOX1Q9UHG3 505 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 UTS2RQ9UKP6 389 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 TMA7Q9Y2S6 64 aaKnown RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 NAALAD2Q9Y3Q0 740 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 NINQ8N4C6 2090 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 IGKV1-8A0A0C4DH67 115 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 A0A1W2PPV9 198 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 BICDL2A1A5D9 508 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 PRSS29PA6NIE9 313 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 MYO1CO00159 1063 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 EIF3FO00303 357 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CHST10O43529 356 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HCRTR2O43614 444 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 PLPP2O43688 288 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 VPS26AO75436 327 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 SFTPBP07988 381 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CHRM2P08172 466 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 RBMY1A1P0DJD3 496 aaKnown RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 KRT3P12035 628 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ATP1B2P14415 290 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 PSMB1P20618 241 aaKnown RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 TCEA1P23193 301 aaKnown RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 STIP1P31948 543 aaKnown RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HMGCLP35914 325 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HCAR3P49019 387 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 LHX2P50458 406 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 TPD52P55327 224 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 RPA4Q13156 261 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 DYRK1AQ13627 763 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 KBTBD12Q3ZCT8 623 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CCSMST1Q4G0I0 132 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 C4orf46Q504U0 113 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HSDL2Q6YN16 418 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 Q6ZSR9 355 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CLNKQ7Z7G1 428 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 AMIGO2Q86SJ2 522 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 LDB1Q86U70 411 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 C10orf67Q8IYJ2 551 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 MYO1HQ8N1T3 1032 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ZCCHC24Q8N2G6 241 aaKnown RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CLDN19Q8N6F1 224 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 MSANTD4Q8NCY6 345 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 VPS37AQ8NEZ2 397 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 STEAP2Q8NFT2 490 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ATG4AQ8WYN0 398 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HSD17B8Q92506 261 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ULK4Q96C45 1275 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 RHBDF1Q96CC6 855 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 KTI12Q96EK9 354 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 FBXL20Q96IG2 436 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF597Q96LX8 424 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF778Q96MU6 729 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 HBEGFQ99075 208 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 GPA33Q99795 319 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CRACR2AQ9BSW2 395 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 TRIM54Q9BYV2 358 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 RHBGQ9H310 441 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 MYOZ1Q9NP98 299 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 SIX2Q9NPC8 291 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 NPAP1Q9NZP6 1156 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 SLC39A10Q9ULF5 831 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 C15orf41Q9Y2V0 281 aa4.25□□□□□ -1.73
SDCBP-205ENST00000447267 CHCHD2Q9Y6H1 151 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-205ENST00000447267 IGHV3OR16-10A0A075B7F0 116 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 IGKV3D-11A0A0A0MRZ8 115 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 CCDC154A6NI56 674 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 F8VZ95 297 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 HAT1O14929 419 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 TPM1P09493 284 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 DDX5P17844 614 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 HOXD3P31249 432 aaPredicted RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RPL4P36578 427 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RPL21P46778 160 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 ANXA11P50995 505 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 CLDN18P56856 261 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 SLC37A1P57057 533 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 LMO4P61968 165 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RPS7P62081 194 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RPL7AP62424 266 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 ITGA9Q13797 1035 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RABEP1Q15276 862 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 RBBP5Q15291 538 aaKnown RBP4.24□□□□□ -1.73
SDCBP-205ENST00000447267 GUSBP1Q15486 140 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 PIGGQ5H8A4 983 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 TSTD2Q5T7W7 516 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 ADNP2Q6IQ32 1131 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 TMCO3Q6UWJ1 677 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 CES3Q6UWW8 571 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 TMEM64Q6YI46 380 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 SLC46A3Q7Z3Q1 461 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 UBQLNLQ8IYU4 475 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 TOR1AIP2Q8NFQ8 470 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 FNDC9Q8TBE3 224 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms