RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 C1orf94Q6P1W5 598 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 TMEM159Q96B96 161 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 FOPNLQ96NB1 174 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SLC22A12Q96S37 553 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 SEC22CQ9BRL7 303 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ZNF649Q9BS31 505 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 C20orf85Q9H1P6 137 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 MED20Q9H944 212 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 A4GALTQ9NPC4 353 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 KLHL42Q9P2K6 505 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 KIF25Q9UIL4 384 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 ACAD8Q9UKU7 415 aa13.09□□□□□ -0.31
VPS52-212ENST00000445902 KDM4BO94953 1096 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 APOC3P02656 99 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 CTSCP53634 463 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 PRKAG1P54619 331 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 STXBP1P61764 594 aaKnown RBP13.08□□□□□ -0.31
VPS52-212ENST00000445902 PLD1Q13393 1074 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.31
VPS52-212ENST00000445902 PYHIN1Q6K0P9 492 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 RETSATQ6NUM9 610 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 OR13C5Q8NGS8 318 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 NEURL3Q96EH8 262 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 TMEM169Q96HH4 297 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 BTBD1Q9H0C5 482 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 CA10Q9NS85 328 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 B4GALT6Q9UBX8 382 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 CBLCQ9ULV8 474 aa13.08□□□□□ -0.31
VPS52-212ENST00000445902 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 E9PI62 339 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 PI15O43692 258 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 EPPINO95925 133 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 IGSF6O95976 241 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 CATP04040 527 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 NMBP08949 121 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 GPR4P46093 362 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 TFAP2EQ6VUC0 442 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ZNF480Q8WV37 535 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 TTTY10Q9BZA0 68 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 TMEM168Q9H0V1 697 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 OR51I1Q9H343 314 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 WASH6PQ9NQA3 447 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 OR6C75A6NL08 312 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 CPSF4LA6NMK7 179 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 GMDSO60547 372 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ALPPL2P10696 532 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ATP5A1P25705 553 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 MTNR1BP49286 362 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 AKR1D1P51857 326 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 MAZP56270 477 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 CNTN1Q12860 1018 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 TMEM255AQ5JRV8 349 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ENTPD8Q5MY95 495 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 RPTNQ6XPR3 784 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 DCAF4L2Q8NA75 395 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 BBS10Q8TAM1 723 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 CNOT9Q92600 299 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 FERD3LQ96RJ6 166 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.32
VPS52-212ENST00000445902 ZNF416Q9BWM5 594 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 MGAT4CQ9UBM8 478 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 RPS6KB2Q9UBS0 482 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 COPS3Q9UNS2 423 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
VPS52-212ENST00000445902 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 PDCD5O14737 125 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 SYN3O14994 580 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 MID1O15344 667 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 AHRP35869 848 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 ACVR1BP36896 505 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 RPL35P42766 123 aaKnown RBP13.07□□□□□ -0.32
VPS52-212ENST00000445902 SPINT3P49223 89 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 MELKQ14680 651 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 NDUFA9Q16795 377 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 FAM198BQ6UWH4 519 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 BTN2A1Q7KYR7 527 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
VPS52-212ENST00000445902 TBC1D19Q8N5T2 526 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 OR56A3Q8NH54 315 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 DMRTA2Q96SC8 542 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.07□□□□□ -0.32
VPS52-212ENST00000445902 NTNG1Q9Y2I2 539 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
VPS52-212ENST00000445902 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms