RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 OR4N2Q8NGD1 307 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 CNPPD1Q9BV87 410 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 FNDC11Q9BVV2 318 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 PRR14Q9BWN1 585 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 ING2Q9H160 280 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 PCDHGB2Q9Y5G2 931 aa17.4■□□□□ 0.38
POLR1E-203ENST00000442009 COL5A1P20908 1838 aaPredicted RBP17.4■□□□□ 0.38
POLR1E-203ENST00000442009 CDHR4A6H8M9 788 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 ADAP00813 363 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 IGKV3-11P04433 115 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 CRHBPP24387 322 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 HLCSP50747 726 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 PGDP52209 483 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 NR1H2P55055 460 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 SLC37A1P57057 533 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 PLAURQ03405 335 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 CDK5R2Q13319 367 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 FGD3Q5JSP0 725 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 RBM48Q5RL73 367 aaKnown RBP17.39■□□□□ 0.37
POLR1E-203ENST00000442009 TCEAL6Q6IPX3 200 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 PODNL1Q6PEZ8 512 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
POLR1E-203ENST00000442009 LAPTM4BQ86VI4 370 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 GFM1Q96RP9 751 aaKnown RBP17.39■□□□□ 0.37
POLR1E-203ENST00000442009 REV1Q9UBZ9 1251 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 SLC13A4Q9UKG4 626 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 MGAT4BQ9UQ53 548 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 PCDHGA6Q9Y5G7 932 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 GMPPBQ9Y5P6 360 aa17.39■□□□□ 0.37
POLR1E-203ENST00000442009 CACNA1HO95180 2353 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 NPIPB9F8W1W9 429 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 DDAH2O95865 285 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 TNNI3P19429 210 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 ZFP36L1Q07352 338 aaKnown RBP17.38■□□□□ 0.37
POLR1E-203ENST00000442009 ELAVL1Q15717 326 aaKnown RBP17.38■□□□□ 0.37
POLR1E-203ENST00000442009 MINDY4Q4G0A6 757 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 EIPR1Q53HC9 387 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF385CQ66K41 422 aaPredicted RBP17.38■□□□□ 0.37
POLR1E-203ENST00000442009 PWWP2BQ6NUJ5 590 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 PGBD2Q6P3X8 592 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 KLHL17Q6TDP4 642 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 TMEM151BQ8IW70 566 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 PLPP5Q8NEB5 264 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 DGCR6LQ9BY27 220 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 FAM192AQ9GZU8 254 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 ANKRD19PQ9H560 264 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF556Q9HAH1 456 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 RARRES3Q9UL19 164 aa17.38■□□□□ 0.37
POLR1E-203ENST00000442009 A0A087WXM4 84 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 D6RAR5 112 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 KHNYNO15037 678 aaKnown RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 CYP7B1O75881 506 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 ALDH3B2P48448 385 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 CD300LDQ6UXZ3 194 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 LINC00471Q8N535 108 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF566Q969W8 418 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 GTPBP3Q969Y2 492 aaKnown RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 APOL4Q9BPW4 351 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 VN1R1Q9GZP7 353 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 SEMA4GQ9NTN9 838 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 PRODH2Q9UF12 536 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 COL27A1Q8IZC6 1860 aaPredicted RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 NPIPA5A0A0B4J1W7 369 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 NPIPA7E9PJI5 369 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 THY1P04216 161 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 NPIPA8P0DM63 369 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 POU2F1P14859 743 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 GGT2P36268 569 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 GRK6P43250 576 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 RGS8P57771 180 aaPredicted RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 TRA2AQ13595 282 aaKnown RBP eCLIP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 MRPL2Q5T653 305 aaKnown RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 Q6ZPB1 254 aaPredicted RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 BPHLQ86WA6 291 aaPredicted RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF321PQ8N8H1 164 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF721Q8TF20 911 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 ITPAQ9BY32 194 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 PNO1Q9NRX1 252 aaKnown RBP17.37■□□□□ 0.37
POLR1E-203ENST00000442009 CTSFQ9UBX1 484 aa17.37■□□□□ 0.37
POLR1E-203ENST00000442009 SCRG1O75711 98 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 GP1BAP07359 652 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 CCDC159P0C7I6 412 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 AGXTP21549 392 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 DRD5P21918 477 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 ACP1P24666 158 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 TPD52P55327 224 aaPredicted RBP17.36■□□□□ 0.37
POLR1E-203ENST00000442009 CXCR4P61073 352 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 ESRRGP62508 458 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 LSM11P83369 360 aaKnown RBP eCLIP17.36■□□□□ 0.37
POLR1E-203ENST00000442009 HOXC5Q00444 222 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 MAD2L1BPQ15013 274 aaPredicted RBP17.36■□□□□ 0.37
POLR1E-203ENST00000442009 ZNF141Q15928 474 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 NKAIN1Q4KMZ8 207 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 FLYWCH1Q4VC44 716 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 ENTPD8Q5MY95 495 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 LAIR1Q6GTX8 287 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 C1orf94Q6P1W5 598 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 ZER1Q7Z7L7 766 aa17.36■□□□□ 0.37
POLR1E-203ENST00000442009 SATL1Q86VE3 508 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms