RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 A0A1B0GV72 72 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SGK494L7N484 410 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 NRP2O60462 931 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ESRRBO95718 433 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 GLP2RO95838 553 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SMIM10L1P0DMW3 83 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 NDUFS1P28331 727 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 GNPDA1P46926 289 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SLC37A1P57057 533 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 OGDHQ02218 1023 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FGL1Q08830 312 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 TFDP2Q14188 446 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CBWD5Q5RIA9 395 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CERCAMQ5T4B2 595 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ZNF544Q6NX49 715 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 RNF113BQ8IZP6 322 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 LILRA2Q8N149 483 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 LMNTD1Q8N9Z9 388 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FCGR1BQ92637 280 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PLPPR2Q96GM1 343 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SMIM10Q96HG1 83 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SH3YL1Q96HL8 342 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PWWP2AQ96N64 755 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ULBP1Q9BZM6 244 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CCDC90BQ9GZT6 254 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 C1orf198Q9H425 327 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ZFYVE1Q9HBF4 777 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 DRG1Q9Y295 367 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SNX24Q9Y343 169 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PAGE4O60829 102 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 RPN2P04844 631 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 S100A7P31151 101 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 ADARB1P78563 741 aaKnown RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 LSM11P83369 360 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 GRIK2Q13002 908 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 AGERQ15109 404 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 MPPED2Q15777 294 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 PIGTQ969N2 578 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 FMO2Q99518 471 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 DPH1Q9BZG8 443 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 WDR76Q9H967 626 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 YBX2Q9Y2T7 364 aaKnown RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 MGAMO43451 1857 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 A0A0U1RRA0 63 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 FAM187AA6NFU0 413 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 CTDSPLO15194 276 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 EMC8O43402 210 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 ACTL6AO96019 429 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 FDXRP22570 491 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 CFHR2P36980 270 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 CSKP41240 450 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 PRKXP51817 358 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 SLC35D3Q5M8T2 416 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 STX19Q8N4C7 294 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 SPATA6LQ8N4H0 392 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 HORMAD2Q8N7B1 307 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 ASB11Q8WXH4 323 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 MCCC1Q96RQ3 725 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 SPATA5L1Q9BVQ7 753 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 TRMT61BQ9BVS5 477 aaKnown RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 FZD4Q9ULV1 537 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 AUP1Q9Y679 476 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 EMSYQ7Z589 1322 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 PRSS37A4D1T9 235 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 MBLAC1A4D2B0 266 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 ZNF99A8MXY4 864 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 SRPX2O60687 465 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 H6PDO95479 791 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 NDUFB10O96000 172 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 IL1R2P27930 398 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 CAMPP49913 170 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 CRYBA4P53673 196 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 SELENBP1Q13228 472 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 GRASPQ7Z6J2 395 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 TMEM56Q96MV1 263 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 OR5M11Q96RB7 305 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 NUDT22Q9BRQ3 303 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 ASCC2Q9H1I8 757 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-206ENST00000441438 LMAN1LQ9HAT1 526 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 TMEM56-RWDD3S4R434 201 aa9.84□□□□□ -0.83
SYNE2-206ENST00000441438 LRRC37A2A6NM11 1700 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 A0A087X0T9 212 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 A0A096LPE4 126 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 J3KTA2 159 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 EDIL3O43854 480 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 RAMP3O60896 148 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 TXNDC12O95881 172 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 SERPINA1P01009 418 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 CD5P06127 495 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 CD40P25942 277 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 ABHD18Q0P651 414 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 KEAP1Q14145 624 aa9.83□□□□□ -0.84
SYNE2-206ENST00000441438 AASDHQ4L235 1098 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-206ENST00000441438 TIGD5Q53EQ6 642 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms