RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 XCR1P46094 333 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 DOC2BQ14184 412 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 PUM1Q14671 1186 aaKnown RBP eCLIP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF79Q15937 498 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 MICAQ29983 383 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ATCAYQ86WG3 371 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 NUP43Q8NFH3 380 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 RSC1A1Q92681 617 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 MGLLQ99685 303 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 CNPPD1Q9BV87 410 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ENTPD2Q9Y5L3 495 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 DPM1O60762 260 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 GPX5O75715 221 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 IGLV3-19P01714 112 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 ANXA8P13928 327 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 RPS5P46782 204 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 LSSP48449 732 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 XKP51811 444 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 ARFIP1P53367 373 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 VSX2P58304 361 aaPredicted RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 DEFB110Q30KQ9 67 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF367Q7RTV3 350 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 LAX1Q8IWV1 398 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 B3GNT7Q8NFL0 401 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 OR56A1Q8NGH5 318 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 DOK4Q8TEW6 326 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 BARHL1Q9BZE3 327 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 EVA1BQ9NVM1 165 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 MS4A12Q9NXJ0 267 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 PHF11Q9UIL8 331 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 CES1P1Q9UKY3 287 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 IGHV1OR15-9A0A0B4J2B8 117 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 TPST2O60704 377 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 CCNB2O95067 398 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 RPS19P39019 145 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 UBE2IP63279 158 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 PRSS41Q7RTY9 318 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 RBM45Q8IUH3 476 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF655Q8N720 491 aaPredicted RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 GPR32P1Q8NGA4 272 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 NT5CQ8TCD5 201 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 SERINC2Q96SA4 455 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 LRRC61Q9BV99 259 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 QRSL1Q9H0R6 528 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
LIMD1-202ENST00000440097 ACER3Q9NUN7 267 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 TOR4AQ9NXH8 423 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
LIMD1-202ENST00000440097 A0A0J9YY10 115 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 PRAMEF27A3QJZ7 478 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 FAM227AF5H4B4 570 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 EMC8O43402 210 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 TNFSF14O43557 240 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 DNAJB6O75190 326 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 RECKO95980 971 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 GABRB1P18505 474 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 POU1F1P28069 291 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 LIM2P55344 173 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 TNFRSF17Q02223 184 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 SSX1Q16384 188 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 TIMM50Q3ZCQ8 353 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 LRRC25Q8N386 305 aaPredicted RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 AQP11Q8NBQ7 271 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 BAHD1Q8TBE0 780 aaPredicted RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 HLA-CQ95604 372 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 ELP4Q96EB1 424 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 MRPS17Q9Y2R5 130 aaKnown RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 MRPS2Q9Y399 296 aaKnown RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 CCDC182A6NF36 153 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 M0R3H8 397 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 MAZP56270 477 aaKnown RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
LIMD1-202ENST00000440097 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 C19orf48Q6RUI8 117 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 TMEM64Q6YI46 380 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 CSNK1A1LQ8N752 337 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 OR5H6Q8NGV6 325 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 ZFPM2Q8WW38 1151 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 SLC9A6Q92581 669 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF354BQ96LW1 612 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 WFDC6Q9BQY6 131 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 IL21RQ9HBE5 538 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 DUSP12Q9UNI6 340 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 SPACA6W5XKT8 324 aa13.24□□□□□ -0.29
LIMD1-202ENST00000440097 A0A0B4J293 547 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms