RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 HEPACAMQ14CZ8 416 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 MAPRE2Q15555 327 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 SLC25A35Q3KQZ1 300 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 FAM174BQ3ZCQ3 159 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 TIGD2Q4W5G0 525 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 HLA-DQA1Q5Y7H0 255 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 ANKRD26P1Q6NSI1 321 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 TMEM64Q6YI46 380 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 SPNS3Q6ZMD2 512 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 IKBIPQ70UQ0 350 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 DND1Q8IYX4 353 aaKnown RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 TAGAPQ8N103 731 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 MMP21Q8N119 569 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 FBXW8Q8N3Y1 598 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 GLB1L3Q8NCI6 653 aaPredicted RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 OR7A2PQ8NGA2 310 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 RP9Q8TA86 221 aaKnown RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 PAQR8Q8TEZ7 354 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 NRGNQ92686 78 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 VPS33AQ96AX1 596 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 SPDL1Q96EA4 605 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 DOHHQ9BU89 302 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 FAIM2Q9BWQ8 316 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 WWTR1Q9GZV5 400 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 REEP4Q9H6H4 257 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 SH2D2AQ9NP31 389 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 TEX10Q9NXF1 929 aaPredicted RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 DNAJB12Q9NXW2 375 aaKnown RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 CNIH4Q9P003 139 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 B4GALT7Q9UBV7 327 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 TAGLN3Q9UI15 199 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 MAPRE3Q9UPY8 281 aa8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 EXO1Q9UQ84 846 aaKnown RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 WBP11Q9Y2W2 641 aaKnown RBP8.43□□□□□ -1.06
AC011228.1-201ENST00000439027 MED12Q93074 2177 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 C2orf92A0A1B0GVN3 265 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 CCDC154A6NI56 674 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 TP53I11O14683 189 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ANGPT2O15123 496 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 PGRMC2O15173 223 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 CFLARO15519 480 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 AIFM1O95831 613 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 PGRP06401 933 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 LAMP1P11279 417 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 DRD2P14416 443 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 GABRA1P14867 456 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 DDCP20711 480 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 GDF1P27539 372 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 UQCRC1P31930 480 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 RPL3P39023 403 aaKnown RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 KIR2DL3P43628 341 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 SLC37A1P57057 533 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 C21orf58P58505 322 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 BNIP1Q12981 228 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 STX5Q13190 355 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 RCAN2Q14206 197 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 MMEL1Q495T6 779 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 SPANXN4Q5MJ08 99 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 CPTPQ5TA50 214 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 RIPPLY2Q5TAB7 128 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 OR4F3Q6IEY1 312 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ARSKQ6UWY0 536 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ZNF771Q7L3S4 317 aaPredicted RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 R3HCC1LQ7Z5L2 792 aaKnown RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ULK2Q8IYT8 1036 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 DIO2Q92813 273 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 UCN3Q969E3 161 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 TESCQ96BS2 214 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 PPCDCQ96CD2 204 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 MTERF3Q96E29 417 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 OR52E6Q96RD3 313 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 PRPF18Q99633 342 aaKnown RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 SLC52A3Q9NQ40 469 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 MIEF1Q9NQG6 463 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 SH3BP4Q9P0V3 963 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 ATP6V1HQ9UI12 483 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 CNOT11Q9UKZ1 510 aaKnown RBP8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
AC011228.1-201ENST00000439027 A0A1W2PP18 115 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 C1orf226A1L170 272 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 OR6C76A6NM76 312 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 HSPB2A8KAH6 182 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 B2RBV5 119 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 FBP2O00757 339 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 MRASO14807 208 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 AIM2O14862 343 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 IL6P05231 212 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 SLC35E2P0CK97 266 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 EFNA1P20827 205 aaPredicted RBP8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 ENDOUP21128 410 aaKnown RBP8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 NT5EP21589 574 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 CALB2P22676 271 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 SSTR4P31391 388 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 DNAJA1P31689 397 aaKnown RBP8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 MASP1P48740 699 aa8.41□□□□□ -1.06
AC011228.1-201ENST00000439027 XKP51811 444 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms