RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MCHR1Q99705 422 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 SAP130Q9H0E3 1048 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 ANKRA2Q9H9E1 313 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 FBXO8Q9NRD0 319 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 OSGIN1Q9UJX0 560 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 PILRBQ9UKJ0 227 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 MKLN1Q9UL63 735 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 ERGIC3Q9Y282 383 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 A0A1B0GVT2 93 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 AGAP5A6NIR3 686 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 PATE3B3GLJ2 98 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 BCAT2O15382 392 aaPredicted RBP11.96□□□□□ -0.5
DDX56-204ENST00000431640 DNAJB6O75190 326 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 GUSBP08236 651 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SLC35E2P0CK97 266 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 ACP2P11117 423 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 RGS6P49758 472 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 C1orf61Q13536 156 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 DUSP5Q16690 384 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 PRICKLE4Q2TBC4 344 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 TRMT12Q53H54 448 aaKnown RBP11.96□□□□□ -0.5
DDX56-204ENST00000431640 PLEKHM3Q6ZWE6 761 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 RANBP3LQ86VV4 465 aaPredicted RBP11.96□□□□□ -0.5
DDX56-204ENST00000431640 CYP4Z2PQ8N1L4 340 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SLC15A4Q8N697 577 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 PRSS33Q8NF86 280 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 KBTBD8Q8NFY9 601 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 NDNFQ8TB73 568 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 OSTF1Q92882 214 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 TCTN2Q96GX1 697 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 MGLLQ99685 303 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 LRRC61Q9BV99 259 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 ZNF350Q9GZX5 532 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 MMP27Q9H306 513 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SEMA4GQ9NTN9 838 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SLC6A14Q9UN76 642 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 MRPS2Q9Y399 296 aaKnown RBP11.96□□□□□ -0.5
DDX56-204ENST00000431640 A3GALT2U3KPV4 340 aa11.96□□□□□ -0.5
DDX56-204ENST00000431640 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 SCN3AQ9NY46 2000 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 HYKKA2RU49 373 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 TLX2O43763 284 aaPredicted RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 FGF17O60258 216 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 LDB3O75112 727 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 COQ9O75208 318 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 UBXN7O94888 489 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 PTHP01270 115 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 CSF2P04141 144 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 IGFBP1P08833 259 aaPredicted RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 AVPR1BP47901 424 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 FASLGP48023 281 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 NCS1P62166 190 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 EFNB1P98172 346 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MAP4K2Q12851 820 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 TCF15Q12870 199 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 SHBQ15464 509 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MED22Q15528 200 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 TMEM44Q2T9K0 475 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 WDR45BQ5MNZ6 344 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 GDPGP1Q6ZNW5 385 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MBOAT2Q6ZWT7 520 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 HMGN2P46Q86SG4 172 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MRGPREQ86SM8 312 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MCATQ8IVS2 390 aaKnown RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 SDR16C5Q8N3Y7 309 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 TMCO5AQ8N6Q1 288 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 AMER2Q8N7J2 671 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 COX18Q8N8Q8 333 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 C19orf47Q8N9M1 422 aaKnown RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 WDR36Q8NI36 951 aaKnown RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 PPP1R14BQ96C90 147 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 SLC41A3Q96GZ6 507 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 DCSTAMPQ9H295 470 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 SMOC1Q9H4F8 434 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 ADAP2Q9NPF8 381 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 MRPS33Q9Y291 106 aaKnown RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 GPR55Q9Y2T6 319 aaPredicted RBP11.95□□□□□ -0.5
DDX56-204ENST00000431640 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
DDX56-204ENST00000431640 ARHGEF17Q96PE2 2063 aaPredicted RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 B4DGG1 531 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 M0R129 80 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 CCRL2O00421 344 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 DBTP11182 482 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 ST6GAL1P15907 406 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 TYRP1P17643 537 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 GADD45AP24522 165 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 FPR3P25089 353 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 OPRL1P41146 370 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms