RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR52E2Q8NGJ4 325 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 OR56B4Q8NH76 319 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 GCM1Q9NP62 436 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 CUTCQ9NTM9 273 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 ADAMTS4O75173 837 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 TLE4Q04727 773 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 MPEG1Q2M385 716 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.22
PTPN13-203ENST00000427191 SLC35F2Q8IXU6 374 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 OR5W2Q8NH69 310 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 SLC35A3Q9Y2D2 325 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 SLC2A5P22732 501 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 PRKCZQ05513 592 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 PTERQ96BW5 349 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 FBXL18Q96ME1 805 aa13.71□□□□□ -0.22
PTPN13-203ENST00000427191 ARID1BQ8NFD5 2236 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 LCMT2O60294 686 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 ARSBP15848 533 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CXCR4P61073 352 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 IL13RA1P78552 427 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 MICAQ29983 383 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 ESCO2Q56NI9 601 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 OR51Q1Q8NH59 317 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 RAB8BQ92930 207 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PINK1Q9BXM7 581 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CWH43Q9H720 699 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CNOT2Q9NZN8 540 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 NLKQ9UBE8 527 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 TBPL1P62380 186 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 C16orf78Q8WTQ4 265 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 IMP4Q96G21 291 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 C12orf42Q96LP6 360 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 SLC38A1Q9H2H9 487 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PELI2Q9HAT8 420 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 MED6O75586 246 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 SERPINA5P05154 406 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CFAP77Q6ZQR2 320 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 OR51A7Q8NH64 312 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 RBMXL1Q96E39 390 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CNTNAP3Q9BZ76 1288 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 LRP5LA4QPB2 252 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 SNCGO76070 127 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 FUT4P22083 530 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 MOGSQ13724 837 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 B3GLCTQ6Y288 498 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 OR4K15Q8NH41 348 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 SORCS2Q96PQ0 1159 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 OR52A5Q9H2C5 316 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 ENPP5Q9UJA9 477 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 H7BY64 318 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 AQP2P41181 271 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 NXPE4Q6UWF7 544 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CLEC4CQ8WTT0 213 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PRAP1Q96NZ9 151 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 STSP08842 583 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CKMT1AP12532 417 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 CNIH2Q6PI25 160 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 TMPRSS9Q7Z410 1059 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 DCP2Q8IU60 420 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 LSM5Q9Y4Y9 91 aaKnown RBP13.7□□□□□ -0.22
PTPN13-203ENST00000427191 PCDHA9Q9Y5H5 950 aa13.7□□□□□ -0.22
PTPN13-203ENST00000427191 HTR3BO95264 441 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TMEM185AQ8NFB2 350 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TANKQ92844 425 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 KCNA7Q96RP8 456 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 OR2T1O43869 369 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 RHOP08100 348 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 METTL15P1P0C7V9 234 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 MMP12P39900 470 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 WDR20Q8TBZ3 569 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 NPY6RQ99463 290 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 CMSS1Q9BQ75 279 aaKnown RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 HINT2Q9BX68 163 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TCRBV7S3A2A0A539 114 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TSPAN11A1L157 253 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 A6NHS1 94 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 F6UZH7 168 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 FOXE1O00358 373 aaPredicted RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 IL32P24001 234 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 C6orf89Q6UWU4 347 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 TMEM107Q6UX40 140 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 BRIX1Q8TDN6 353 aaKnown RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 FAM46AQ96IP4 442 aaKnown RBP13.69□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF75AQ96N20 296 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 ENPP4Q9Y6X5 453 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 HLA-HP01893 362 aa13.69□□□□□ -0.22
PTPN13-203ENST00000427191 ITGAMP11215 1152 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms