RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZNF630Q2M218 657 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 M1APQ8TC57 530 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 NSMCE2Q96MF7 247 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 STACQ99469 402 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 GMEB1Q9Y692 573 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 TLN1Q9Y490 2541 aaKnown RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 SCO2O43819 266 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 ABCB7O75027 752 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CYP4B1P13584 511 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 DRD5P21918 477 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 TCEA1P23193 301 aaKnown RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 IL12BP29460 328 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 TLE3Q04726 772 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 PPP1R8Q12972 351 aaKnown RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 KBTBD2Q8IY47 623 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CLIP4Q8N3C7 705 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CANT1Q8WVQ1 401 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 HOXB13Q92826 284 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 ACTR3BQ9P1U1 418 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CHST2Q9Y4C5 530 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 H0YHG0 523 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 STX11O75558 287 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 UGT2B17O75795 530 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 EPPINO95925 133 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 CAPNS1P04632 268 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 SERPINA7P05543 415 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 PCBP3P57721 371 aaKnown RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 CYBRD1Q53TN4 286 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 PTRH1Q86Y79 214 aaKnown RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 LACC1Q8IV20 430 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 GALNT16Q8N428 558 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 GPR32P1Q8NGA4 272 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 LRGUKQ96M69 825 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 NODALQ96S42 347 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF350Q9GZX5 532 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 GPR83Q9NYM4 423 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 PRAMEF25A6NGN4 478 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 M0R3H8 397 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ASNA1O43681 348 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 KRT36O76013 467 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ELF3P78545 371 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 PLAURQ03405 335 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 DECR1Q16698 335 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 GRAMD1BQ3KR37 738 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 COLEC12Q5KU26 742 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 UNQ6494/PRO21346Q6UXR6 183 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 FDCSPQ8NFU4 85 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 OR4D11Q8NGI4 311 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 SH3YL1Q96HL8 342 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 TRNT1Q96Q11 434 aaKnown RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 HES7Q9BYE0 225 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 SEC14L3Q9UDX4 400 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 CFL2Q9Y281 166 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 EPG5Q9HCE0 2579 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 TCRBV5S2A0A599 114 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 hCG_2039718K7EN88 272 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 OIP5O43482 229 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 UTS2O95399 124 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 GKN3PP0CG01 181 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 DCTP40126 519 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 POLE2P56282 527 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 CD226Q15762 336 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ACER2Q5QJU3 275 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 ZCCHC12Q6PEW1 402 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 TMEM156Q8N614 296 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 HSH2DQ96JZ2 352 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 MMADHCQ9H3L0 296 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-202ENST00000424478 STMN3Q9NZ72 180 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 MAGEL2Q9UJ55 1249 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 USP24Q9UPU5 2620 aa12.36□□□□□ -0.43
PRPF39-202ENST00000424478 A0A1W2PQ72 361 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 CFAP73A6NFT4 308 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 OR6C76A6NM76 312 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF891A8MT65 544 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-202ENST00000424478 CYC1P08574 325 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 IL7RP16871 459 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 OC90Q02509 493 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-202ENST00000424478 BNIP2Q12982 314 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 SPINK14Q6IE38 97 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 LYPD8Q6UX82 237 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 FKBP9P1Q75LS8 142 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ARMC8Q8IUR7 673 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 CHDHQ8NE62 594 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-202ENST00000424478 OR52P1PQ8NH57 321 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 NUBPLQ8TB37 319 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 DIO2Q92813 273 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 KALRNO60229 2985 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms