RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 LIMK1P53667 647 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 RPS15AP62244 130 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 CSTF3Q12996 717 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 DDX39BQ13838 428 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 SLC9B1Q4ZJI4 515 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 XKR7Q5GH72 579 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 ZNF766Q5HY98 468 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 GKAP1Q5VSY0 366 aaPredicted RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 SCIMPQ6UWF3 145 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 Q6ZSR9 355 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 FAM57BQ71RH2 274 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PRSS42Q7Z5A4 293 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PRIMA1Q86XR5 153 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PLD3Q8IV08 490 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 DNAJC22Q8N4W6 341 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 GBP7Q8N8V2 638 aaPredicted RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 MFSD9Q8NBP5 474 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 TTLQ8NG68 377 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 OR4D9Q8NGE8 314 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 HUS1BQ8NHY5 278 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 ZNF473Q8WTR7 871 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 C10orf82Q8WW14 230 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 C19orf60Q96EN9 201 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 SLC41A2Q96JW4 573 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PPP1R36Q96LQ0 422 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 C3orf30Q96M34 536 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 OR2A5Q96R48 311 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 GFM1Q96RP9 751 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 MTERF1Q99551 399 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PIMREGQ9BSJ6 248 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 CCDC28BQ9BUN5 200 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 IFT27Q9BW83 186 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 CHRNA10Q9GZZ6 450 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 WDR55Q9H6Y2 383 aaPredicted RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 BRF2Q9HAW0 419 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 FARSBQ9NSD9 589 aaKnown RBP5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 NMRK1Q9NWW6 199 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PPP1R14DQ9NXH3 145 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 TMEM9Q9P0T7 183 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 HCN3Q9P1Z3 774 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 PTGDR2Q9Y5Y4 395 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 AP1M2Q9Y6Q5 423 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 RP1P56715 2156 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 UNC13CQ8NB66 2214 aa5.5□□□□□ -1.53
NIFKP3-201ENST00000417799 COL5A1P20908 1838 aaPredicted RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 GOLGA8QA0A0J9YX86 632 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 IGHV5-10-1A0A0J9YXX1 117 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ATP6AP2A0A1C7CYW4 349 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 GOLGA8OA6NCC3 632 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 A8MU76 341 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TEX22C9J3V5 150 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 D6RAR5 112 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 GOLGA8NF8WBI6 632 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 H0YGG7 62 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 NDUFAB1O14561 156 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 RGS14O43566 566 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ATP6AP2O75787 350 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TBX6O95947 436 aaPredicted RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SERPIND1P05546 499 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SERPINA6P08185 405 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ANKRD34CP0C6C1 535 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 THRAP10827 490 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 NELFEP18615 380 aaKnown RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 CPA2P48052 419 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ARF3P61204 181 aaPredicted RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 RPS13P62277 151 aaKnown RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 HMGCS1Q01581 520 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 RGS1Q08116 209 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ILKQ13418 452 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TRA2AQ13595 282 aaKnown RBP eCLIP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TRIP6Q15654 476 aaKnown RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 IMPG1Q17R60 797 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 PRICKLE4Q2TBC4 344 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ATP6AP1LQ52LC2 224 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TMEM268Q5VZI3 342 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ADNP2Q6IQ32 1131 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 C1orf122Q6ZSJ8 110 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 H1FNTQ75WM6 255 aaPredicted RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ARHGAP22Q7Z5H3 698 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 VN1R4Q7Z5H5 301 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 R3HCC1LQ7Z5L2 792 aaKnown RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 GLRX5Q86SX6 157 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ASPGQ86U10 573 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 KMT5CQ86Y97 462 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 GHDCQ8N2G8 530 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 RNF175Q8N4F7 328 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 CCDC197Q8NCU1 140 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 DEFB124Q8NES8 71 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TRPV3Q8NET8 790 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 OR2T11Q8NH01 316 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 CREB3L4Q8TEY5 395 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SLC13A3Q8WWT9 602 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 RERGQ96A58 199 aaPredicted RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TUBGCP3Q96CW5 907 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TM4SF19Q96DZ7 209 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 CMTM7Q96FZ5 175 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 METTL2AQ96IZ6 378 aaKnown RBP5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 PPP3R2Q96LZ3 170 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 OR52B2Q96RD2 323 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms