RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PRIM2P49643 509 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 RPL14P50914 215 aaKnown RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 DSCR4P56555 118 aaPredicted RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 EMX2Q04743 252 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 TFF3Q07654 80 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 STX5Q13190 355 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 PDCD2Q16342 344 aaPredicted RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 LSM12Q3MHD2 195 aaKnown RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 DCST1Q5T197 706 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 AGBL2Q5U5Z8 902 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 HHATQ5VTY9 493 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 CES4AQ5XG92 561 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 ZCCHC12Q6PEW1 402 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 ACBD4Q8NC06 268 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 PIK3R3Q92569 461 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 HOXB13Q92826 284 aaPredicted RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 DSN1Q9H410 356 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 PTGES2Q9H7Z7 377 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 ZNF395Q9H8N7 513 aaPredicted RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 VIPAS39Q9H9C1 493 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 NPDC1Q9NQX5 325 aaPredicted RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 ZCCHC3Q9NUD5 404 aaKnown RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
NUP50-204ENST00000417702 FLRT3Q9NZU0 649 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
NUP50-204ENST00000417702 NUP214P35658 2090 aaPredicted RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 H0Y3Z8 333 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 BGNP21810 368 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 TCEA1P23193 301 aaKnown RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 CEACAM8P31997 349 aaPredicted RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 MAP3K8P41279 467 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 SRYQ05066 204 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 STX3Q13277 289 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 MPP2Q14168 576 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 SMU1Q2TAY7 513 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 SPDYE7PQ495Y7 208 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 MFSD12Q6NUT3 480 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 LIX1LQ8IVB5 337 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 ZNF295-AS1Q8N0V1 137 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 KRTCAP2Q8N6L1 136 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 FADS6Q8N9I5 356 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 FBXO30Q8TB52 745 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 OR5P2Q8WZ92 322 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 JADE3Q92613 823 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 TLCD1Q96CP7 247 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 COQ8BQ96D53 544 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 FAM120BQ96EK7 910 aaKnown RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 GIMAP5Q96F15 307 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 C14orf79Q96F83 325 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 LRRC46Q96FV0 321 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 CHMP6Q96FZ7 201 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 PPP1R36Q96LQ0 422 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 SLC24A3Q9HC58 644 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 HHATLQ9HCP6 504 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 RPH3AQ9Y2J0 694 aaPredicted RBP13.91□□□□□ -0.18
NUP50-204ENST00000417702 MYO9AB2RTY4 2548 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 ARHGAP21Q5T5U3 1957 aa13.91□□□□□ -0.18
NUP50-204ENST00000417702 ZIC3O60481 467 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 ACP2P11117 423 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 G6PDP11413 515 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 IGFBP2P18065 325 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 HK1P19367 917 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 BMP5P22003 454 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 CHMP24386 653 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 STARP49675 285 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 SLC18A1P54219 525 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 GFRA1P56159 465 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 WNT3P56703 355 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 CLDN8P56748 225 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 C17orf67Q0P5P2 114 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 GANABQ14697 944 aaKnown RBP13.9□□□□□ -0.18
NUP50-204ENST00000417702 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 COX18Q8N8Q8 333 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 SLC16A11Q8NCK7 471 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 OR56A1Q8NGH5 318 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 DUSP19Q8WTR2 217 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 SORT1Q99523 831 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 YIPF4Q9BSR8 244 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 BHLHE41Q9C0J9 482 aaPredicted RBP13.9□□□□□ -0.18
NUP50-204ENST00000417702 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 SIRT3Q9NTG7 399 aaPredicted RBP13.9□□□□□ -0.18
NUP50-204ENST00000417702 ASIC5Q9NY37 505 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 MED11Q9P086 117 aa13.9□□□□□ -0.18
NUP50-204ENST00000417702 TMEM120BA0PK00 339 aa13.89□□□□□ -0.19
NUP50-204ENST00000417702 MBD3L4A6NDZ8 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-204ENST00000417702 MBD3L3A6NE82 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-204ENST00000417702 MBD3L5A6NJ08 208 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms