RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TRAPPC6AO75865 159 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 KCNK2O95069 426 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 CPSF4O95639 269 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 LDLRP01130 860 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 IL6P05231 212 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 HPNP05981 417 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 TPOP07202 933 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 UQCRC2P22695 453 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 PTPN6P29350 595 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 IL12AP29459 219 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 DGKQP52824 942 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 TOMM20Q15388 145 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 ZGRF1Q86YA3 2104 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 PLCZ1Q86YW0 608 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 TRIML2Q8N7C3 387 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 FAM110BQ8TC76 370 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 SARAFQ96BY9 339 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 OTUB1Q96FW1 271 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 EBF4Q9BQW3 602 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 SIKE1Q9BRV8 207 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 HHATLQ9HCP6 504 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 SDHAF3Q9NRP4 125 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 EML6Q6ZMW3 1958 aa16.44■□□□□ 0.22
SEMA3B-201ENST00000416295 C2orf72A6NCS6 295 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 WIPF3A6NGB9 483 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 DUXAA6NLW8 204 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 C9JVG2 144 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 SCO2O43819 266 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 FADS1O60427 444 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 UTS2O95399 124 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 IGKV1D-16P01601 117 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 NGFRP08138 427 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 MRPL19P49406 292 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 GAS1P54826 345 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 IRX1P78414 480 aaPredicted RBP16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 FIGNL1Q6PIW4 674 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 MSANTD1Q6ZTZ1 278 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 C6orf120Q7Z4R8 191 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 CD163Q86VB7 1156 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 DOLPP1Q86YN1 238 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 WDSUB1Q8N9V3 476 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 GOT1L1Q8NHS2 421 aaPredicted RBP16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 NEIL3Q8TAT5 605 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 CDS1Q92903 461 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 SLC35G5Q96KT7 338 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 PANX1Q96RD7 426 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 TBL1XR1Q9BZK7 514 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 SLC6A15Q9H2J7 730 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 SERHLQ9NQF3 203 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 PPP4R1LQ9P1A2 415 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 DOPEY1Q5JWR5 2465 aa16.43■□□□□ 0.22
SEMA3B-201ENST00000416295 NPIPA2E9PIF3 369 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 NPIPA3F8WFD2 350 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 ZNHIT1O43257 154 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 ESRRAP11474 423 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 ATP6V1C1P21283 382 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 MATN1P21941 496 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 GRAMD1BQ3KR37 738 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 MIPOL1Q8TD10 442 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 OR7D2Q96RA2 312 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 SLC35A5Q9BS91 424 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 TP63Q9H3D4 680 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 RMND5AQ9H871 391 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 UBQLN4Q9NRR5 601 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 FLRT3Q9NZU0 649 aa16.42■□□□□ 0.22
SEMA3B-201ENST00000416295 UTP20O75691 2785 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 FAM234BA2RU67 622 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 CCDC154A6NI56 674 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 FIGNL2A6NMB9 653 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 E9PLN8 166 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 AGR2O95994 175 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 AK1P00568 194 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 HPGDP15428 266 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 TBXA2RP21731 343 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 GCKP35557 465 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 CHI3L1P36222 383 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 TRPC1P48995 793 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 POLR2JP52435 117 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 DCST2Q5T1A1 773 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 WLSQ5T9L3 541 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 SAXO2Q658L1 398 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 GALNT10Q86SR1 603 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 CLEC4FQ8N1N0 589 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 OR4K17Q8NGC6 315 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 NEURL3Q96EH8 262 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 VKORC1Q9BQB6 163 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 NPHS2Q9NP85 383 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 SPRR3Q9UBC9 169 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 ACAD8Q9UKU7 415 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 MEMO1Q9Y316 297 aa16.41■□□□□ 0.22
SEMA3B-201ENST00000416295 C15orf38-AP3S2A0A0A6YYH1 394 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 ALG1L2C9J202 215 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 RFXANKO14593 260 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 ENDOUP21128 410 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 SRD5A2P31213 254 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 ATP4BP51164 291 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 RPS26P62854 115 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 C17orf67Q0P5P2 114 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 STX5Q13190 355 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms