RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CD8BP10966 210 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ARSBP15848 533 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CSNK2A2P19784 350 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 MPIP34949 423 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 AHRP35869 848 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 BTG1P62324 171 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CDK3Q00526 305 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ADAM15Q13444 863 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 IL18Q14116 193 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 LASP1Q14847 261 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 CEBPEQ15744 281 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ZNF697Q5TEC3 545 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 VASNQ6EMK4 673 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ZNF793Q6ZN11 406 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 TRILQ7L0X0 811 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 MARCH9Q86YJ5 346 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ETFBKMTQ8IXQ9 262 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 FAM109AQ8N4B1 249 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 DNAJC5GQ8N7S2 189 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 LINC01555Q8NAE3 123 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 SRFBP1Q8NEF9 429 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 OR4F15Q8NGB8 312 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 OR2A1Q8NGT9 310 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ZFPM2Q8WW38 1151 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 MED30Q96HR3 178 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 OR7D2Q96RA2 312 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 GTPBP2Q9BX10 602 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 QRSL1Q9H0R6 528 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 SLC38A1Q9H2H9 487 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 TBC1D17Q9HA65 648 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 SEMA4GQ9NTN9 838 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 COQ3Q9NZJ6 369 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 H2AFY2Q9P0M6 372 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CBLCQ9ULV8 474 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ENTPD4Q9Y227 616 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 HCFC2Q9Y5Z7 792 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 A0A0G2JN53 185 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 A0A1W2PQ72 361 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 A0A1W2PR48 441 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 PRRT4C9JH25 899 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 PPM1DO15297 605 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 KLF4O43474 513 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 FRS3O43559 492 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 PRKRAO75569 313 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 CH25HO95992 272 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 CD53P19397 219 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 HIST1H1TP22492 207 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 MTNR1BP49286 362 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 RAB8AP61006 207 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 MBOAT2Q6ZWT7 520 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 GET4Q7L5D6 327 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 C12orf40Q86WS4 652 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CCDC116Q8IYX3 515 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 KLK6Q92876 244 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 NXPE3Q969Y0 559 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 MS4A6EQ96DS6 147 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 FAM46AQ96IP4 442 aaKnown RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 FERD3LQ96RJ6 166 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 SARGQ9BW04 601 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 AICDAQ9GZX7 198 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 KCNN2Q9H2S1 579 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 NARFLQ9H6Q4 476 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 KRCC1Q9NPI7 259 aaPredicted RBP9.16□□□□□ -0.94
CD44-206ENST00000415148 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 IGKV1-8A0A0C4DH67 115 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 DUXAA6NLW8 204 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 C1QTNF3-AMACRE9PGA6 284 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 J3QRE1 110 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 PGRMC2O15173 223 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 FKTNO75072 461 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ERAL1O75616 437 aaKnown RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 OR5F1O95221 314 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 AGR2O95994 175 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 STATHP02808 62 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 SERPIND1P05546 499 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ALPPL2P10696 532 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 CELP19835 753 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 TRIM23P36406 574 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 INPP1P49441 399 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 RAB28P51157 221 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ERVFC1P60507 584 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 FZD5Q13467 585 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 CCDC85BQ15834 202 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 PGGHGQ32M88 737 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ZNF791Q3KP31 576 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 WDR45BQ5MNZ6 344 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 FAM205BPQ63HN1 556 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 BICRALQ6AI39 1079 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 SLC48A1Q6P1K1 146 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ABHD17CQ6PCB6 329 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ZNF322Q6U7Q0 402 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 GLRX5Q86SX6 157 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 AMIGO1Q86WK6 493 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 GID4Q8IVV7 300 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 ACOT4Q8N9L9 421 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms