RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 IGHG3P01860 377 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 EVI2BP34910 448 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 RFX3P48380 749 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 GYS2P54840 703 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 CASP9P55211 416 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 HSF1Q00613 529 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 GRAMD1BQ3KR37 738 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 AGKQ53H12 422 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 TIGD3Q6B0B8 471 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 SLC2A7Q6PXP3 512 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 APOOLQ6UXV4 268 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 ZNF621Q6ZSS3 439 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 SPDL1Q96EA4 605 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 CHMP6Q96FZ7 201 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 ITCHQ96J02 903 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 JSRP1Q96MG2 331 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-203ENST00000409783 GNRHR2Q96P88 292 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 OR51I1Q9H343 314 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 RMND5AQ9H871 391 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 KLHL14Q9P2G3 628 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 ABCG2Q9UNQ0 655 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 WIF1Q9Y5W5 379 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 LIPGQ9Y5X9 500 aa20.43■□□□□ 0.86
PTCD3-203ENST00000409783 C17orf51A8MQB3 221 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 GNB5O14775 395 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 ZNHIT1O43257 154 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 TRPC1P48995 793 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 SRSF1Q07955 248 aaKnown RBP eCLIP20.42■□□□□ 0.86
PTCD3-203ENST00000409783 GTDC1Q4AE62 458 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 DCST2Q5T1A1 773 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 ANGPTL8Q6UXH0 198 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 DNAJC14Q6Y2X3 702 aaPredicted RBP20.42■□□□□ 0.86
PTCD3-203ENST00000409783 GHDCQ8N2G8 530 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 TRIML2Q8N7C3 387 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 CHDHQ8NE62 594 aaPredicted RBP20.42■□□□□ 0.86
PTCD3-203ENST00000409783 OR4C3Q8NH37 302 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 ZFP90Q8TF47 636 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 C10orf82Q8WW14 230 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 PAIP1Q9H074 479 aaKnown RBP20.42■□□□□ 0.86
PTCD3-203ENST00000409783 RABEP2Q9H5N1 569 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 QPCTLQ9NXS2 382 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 ZNF835Q9Y2P0 537 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 C15orf41Q9Y2V0 281 aa20.42■□□□□ 0.86
PTCD3-203ENST00000409783 CLEC18AA5D8T8 446 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 DUXAA6NLW8 204 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 NR5A2O00482 541 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 NGFRP08138 427 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 ELAVL4P26378 380 aaKnown RBP20.41■□□□□ 0.86
PTCD3-203ENST00000409783 LCN1P31025 176 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 CHI3L1P36222 383 aaPredicted RBP20.41■□□□□ 0.86
PTCD3-203ENST00000409783 MASP1P48740 699 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 MVDP53602 400 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 KCNC4Q03721 635 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 ELOAQ14241 798 aaKnown RBP20.41■□□□□ 0.86
PTCD3-203ENST00000409783 PAGE3Q5JUK9 113 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 HEPHL1Q6MZM0 1159 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 CLEC18BQ6UXF7 455 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 CLEC18CQ8NCF0 446 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 SDF2Q99470 211 aa20.41■□□□□ 0.86
PTCD3-203ENST00000409783 PDE9AO76083 593 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 OXSR1O95747 527 aaPredicted RBP20.4■□□□□ 0.86
PTCD3-203ENST00000409783 OR12D1P0DN82 309 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 TBXA2RP21731 343 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 SEC24CP53992 1094 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 FUT5Q11128 374 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 SLC10A1Q14973 349 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 TNFAIP8L2Q6P589 184 aaPredicted RBP20.4■□□□□ 0.86
PTCD3-203ENST00000409783 TRILQ7L0X0 811 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 RNF130Q86XS8 419 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 OR1J4Q8NGS1 313 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 RAB8BQ92930 207 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 G6PC3Q9BUM1 346 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 ACKR4Q9NPB9 350 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 FAM53CQ9NYF3 392 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 OSGIN2Q9Y236 505 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 PCDHB14Q9Y5E9 798 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 PCDHGB3Q9Y5G1 929 aa20.4■□□□□ 0.86
PTCD3-203ENST00000409783 A0A096LPI6 279 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 A0A1B0GTH9 108 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 A0A1B0GVC2 190 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 PRAMEF27A3QJZ7 478 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 ALG1L2C9J202 215 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 NPIPB9F8W1W9 429 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 HMGN4O00479 90 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 SCO2O43819 266 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 CDC40O60508 579 aaKnown RBP eCLIP20.39■□□□□ 0.85
PTCD3-203ENST00000409783 ZIC2O95409 532 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-203ENST00000409783 STSP08842 583 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 LSP1P33241 339 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 ARHGAP11BQ3KRB8 267 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 COX20Q5RI15 118 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 C6orf10Q5SRN2 563 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 LRIF1Q5T3J3 769 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 AP1ARQ63HQ0 302 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 Q6ZPB1 254 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-203ENST00000409783 MARCH3Q86UD3 253 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 PLCZ1Q86YW0 608 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 MSRB3Q8IXL7 192 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 PRR7Q8TB68 274 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 AURKBQ96GD4 344 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms