RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 FRKP42685 505 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 EEFSECP57772 596 aaKnown RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 VSX2P58304 361 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 MLF1P58340 268 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 SLC26A5P58743 744 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 RPL15P61313 204 aaKnown RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 EFNB1P98172 346 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 CBX3Q13185 183 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PTPRCAPQ14761 206 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 TRIP13Q15645 432 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 BCL2A1Q16548 175 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 RBM20Q5T481 1227 aaKnown RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PRAMEF8Q5VWM4 474 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 MLIPQ5VWP3 458 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PRAMEF7Q5VXH5 474 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 ZNF324BQ6AW86 544 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 CDC73Q6P1J9 531 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 DUS1LQ6P1R4 473 aaKnown RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 TMEM108Q6UXF1 575 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 SLC30A8Q8IWU4 369 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PEX5LQ8IYB4 626 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 CENPLQ8N0S6 344 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 SPARTQ8N0X7 666 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 MDS2Q8NDY4 140 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 OR11G2Q8NGC1 345 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PSMA8Q8TAA3 256 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 SMIM14Q96QK8 99 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 FAM118BQ9BPY3 351 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 REXO4Q9GZR2 422 aaKnown RBP3.49□□□□□ -1.85
UBE3A-202ENST00000397954 CLMPQ9H6B4 373 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 C10orf88Q9H8K7 445 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 PRTFDC1Q9NRG1 225 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 SDHAF3Q9NRP4 125 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 ETAA1Q9NY74 926 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 FBXL4Q9UKA2 621 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 ZNF835Q9Y2P0 537 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 FER1L5A0AVI2 2057 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 ANKRD12Q6UB98 2062 aa3.49□□□□□ -1.85
UBE3A-202ENST00000397954 IGLV3-32A0A0A0MS00 114 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 A0A1W2PQD3 144 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 NPEPPSL1A6NEC2 478 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 WIPF3A6NGB9 483 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 GAGE10A6NGK3 116 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TAPBPO15533 448 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 BUD23O43709 281 aaKnown RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 OR1F1O43749 312 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 IGHG3P01860 377 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ALDOAP04075 364 aaKnown RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 STSP08842 583 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 PRR35P0CG20 571 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 NR2F6P10588 404 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 GFAPP14136 432 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 GABRA1P14867 456 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ZNF28P17035 718 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 HOXB6P17509 224 aaKnown RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 COL8A1P27658 744 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ATP4BP51164 291 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 RAP1GDS1P52306 607 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TPD52P55327 224 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 FOXL2P58012 376 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TIRAPP58753 221 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 FUT7Q11130 342 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TSNQ15631 228 aaKnown RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 RUNDC3AQ59EK9 446 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 XKR6Q5GH73 641 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 PIGGQ5H8A4 983 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TOR1AIP1Q5JTV8 583 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TCHHL1Q5QJ38 904 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ZNF678Q5SXM1 525 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TMEM154Q6P9G4 183 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 PCSK4Q6UW60 755 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 GPRIN3Q6ZVF9 776 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TTLL10Q6ZVT0 673 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TMPRSS11BQ86T26 416 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 CTAGE3PQ8IX95 158 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 PM20D2Q8IYS1 436 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 SNX31Q8N9S9 440 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 NFAM1Q8NET5 270 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 BHLHE22Q8NFJ8 381 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 C16orf52Q8NHV5 167 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 GCDHQ92947 438 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 NEIL2Q969S2 332 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 TMEM125Q96AQ2 219 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 MMABQ96EY8 250 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 UTP23Q9BRU9 249 aaKnown RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 SPRTNQ9H040 489 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-202ENST00000397954 EPB41L4BQ9H329 900 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 IL1RL2Q9HB29 575 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 FAM60AQ9NP50 221 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 MID1IP1Q9NPA3 183 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ACKR4Q9NPB9 350 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 ADAMTS6Q9UKP5 1117 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 SLC12A4Q9UP95 1085 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 CDH23Q9H251 3354 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 KIAA1549Q9HCM3 1950 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 FRG2CA6NGY1 282 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 A8MZ25 164 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 CYR61O00622 381 aa3.48□□□□□ -1.85
UBE3A-202ENST00000397954 WDR1O75083 606 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms