RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FABP12A6NFH5 140 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 CACNB4O00305 520 aaPredicted RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 PLA2G10O15496 165 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 HPGDSO60760 199 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 TMCC2O75069 709 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ACP2P11117 423 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 DRD2P14416 443 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 MYL12AP19105 171 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 HSD17B2P37059 387 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 SMIM11AP58511 58 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 CSTF1Q05048 431 aaKnown RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF155Q12901 538 aaPredicted RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.6□□□□□ -0.398e-8■■□□□ 11.8
GTF2F1-201ENST00000394456 PYDC2Q56P42 97 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 GALNT12Q8IXK2 581 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZCCHC10Q8TBK6 192 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 TEX47Q8TBZ9 253 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 CDS1Q92903 461 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 YIPF2Q9BWQ6 316 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 BCL2L10Q9HD36 194 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 FBXO34Q9NWN3 711 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 MN1Q10571 1320 aaPredicted RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 A0A1B0GVC2 190 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 MEIOCA2RUB1 952 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF860A6NHJ4 632 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 A6NIN4 97 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ISM1B1AKI9 464 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ASGR2P07307 311 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 SDHBP21912 280 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 TEAD1P28347 426 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ACSL1P33121 698 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 MLC1Q15049 377 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 TBRG1Q3YBR2 411 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 PAMR1Q6UXH9 720 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 HSDL2Q6YN16 418 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 RAB42Q8N4Z0 105 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 GIMAP5Q96F15 307 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF681Q96N22 645 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 SMAD5Q99717 465 aaKnown RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 PCBD2Q9H0N5 130 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ISG20L2Q9H9L3 353 aaKnown RBP12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 ADAM29Q9UKF5 820 aa12.6□□□□□ -0.39
GTF2F1-201ENST00000394456 IQCMA0A1B0GVH7 501 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 PRODHO43272 600 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 CELP19835 753 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 COX10Q12887 443 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 FZD5Q13467 585 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC35F1Q5T1Q4 408 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 FCRLBQ6BAA4 426 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ENPP7Q6UWV6 458 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SLC36A4Q6YBV0 504 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF485Q8NCK3 441 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 NACC2Q96BF6 587 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 GDF15Q99988 308 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 NT5DC2Q9H857 520 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 RANGRFQ9HD47 186 aaPredicted RBP12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 GIMAP4Q9NUV9 329 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ENTPD4Q9Y227 616 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SIRT4Q9Y6E7 314 aaPredicted RBP12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 TDRD6O60522 2096 aaKnown RBP12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 PRSS38A1L453 326 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 PROM1O43490 865 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ALPPP05187 535 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 KRT8P05787 483 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 KIR2DL3P43628 341 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 CDH11P55287 796 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 TGM3Q08188 693 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 RPE65Q16518 533 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 PLK5Q496M5 336 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 C3orf38Q5JPI3 329 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 VN1R4Q7Z5H5 301 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 TRIM69Q86WT6 500 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SFTPA2Q8IWL1 248 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 SIRT6Q8N6T7 355 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 C7orf57Q8NEG2 295 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 TSACCQ96A04 125 aaPredicted RBP12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 TMCO6Q96DC7 493 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 MSLNLQ96KJ4 702 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 MRGPRX1Q96LB2 322 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 KCTD7Q96MP8 289 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 WDFY2Q96P53 400 aa12.59□□□□□ -0.39
GTF2F1-201ENST00000394456 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms