RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 AP2B1P63010 937 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TNFAIP6P98066 277 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 LOXL1Q08397 574 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PNRC1Q12796 327 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TSC22D1Q15714 1073 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 CA9Q16790 459 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 C15orf59Q2T9L4 293 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 CCDC57Q2TAC2 916 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 RNASE13Q5GAN3 156 aaKnown RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PIGGQ5H8A4 983 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 C6orf52Q5T4I8 152 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 RAET1GQ6H3X3 334 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 WDR59Q6PJI9 974 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 Q6ZS92 163 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 JAZF1Q86VZ6 243 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 COMMD2Q86X83 199 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 GALNT13Q8IUC8 556 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 MICU2Q8IYU8 434 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 ADGRF2Q8IZF7 708 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 ATAD1Q8NBU5 361 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 NOA1Q8NC60 698 aaKnown RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF439Q8NDP4 499 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TRPV3Q8NET8 790 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR5M9Q8NGP3 310 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 SCAMP5Q8TAC9 235 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 KLF14Q8TD94 323 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 RASSF5Q8WWW0 418 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMEM101Q96IK0 257 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM81BQ96LP2 452 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRRC1Q96M27 445 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 CHCHD6Q9BRQ6 235 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 NICN1Q9BSH3 213 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 NDFIP1Q9BT67 221 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 RNF126Q9BV68 326 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 APOL5Q9BWW9 433 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 LIME1Q9H400 295 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 FBXL15Q9H469 300 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TAF1DQ9H5J8 278 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 KIF9Q9HAQ2 790 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 HHATLQ9HCP6 504 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 C1orf112Q9NSG2 853 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 GIMAP4Q9NUV9 329 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 KCND2Q9NZV8 630 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PIPOXQ9P0Z9 390 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 TSPYL4Q9UJ04 414 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 DNPEPQ9ULA0 475 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PRPF19Q9UMS4 504 aaKnown RBP-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 FBXO7Q9Y3I1 522 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 CEP83Q9Y592 693 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 U3KQK5 164 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 RLFQ13129 1914 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 PNPLA6Q8IY17 1366 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 SCN1AP35498 2009 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 CECR2Q9BXF3 1484 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 FER1L5A0AVI2 2057 aa-1.39□□□□□ -2.63
RNU6-540P-201ENST00000384622 NEDD4P46934 1319 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 RPGRIP1LQ68CZ1 1315 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 CENPJQ9HC77 1338 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 BCL9O00512 1426 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ADAMTS13Q76LX8 1427 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PAPPAQ13219 1627 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 AHDC1Q5TGY3 1603 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 LCTP09848 1927 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 CITO14578 2027 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF860A6NHJ4 632 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 A8MWL6 223 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 MAP2K7O14733 419 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 MEIS2O14770 477 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 MCF2LO15068 1137 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ANP32CO43423 234 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PGLYRP1O75594 196 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ALDH1L1O75891 902 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ERC2-IT1O76042 136 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 MPZL1O95297 269 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 GPR75O95800 540 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 LY6G6CO95867 125 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PTTG1O95997 202 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 TIMP1P01033 207 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 GBAP04062 536 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 KLK1P06870 262 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 HSPA8P11142 646 aaKnown RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 LAMP1P11279 417 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PSKH1P11801 424 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF35P13682 527 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 C4BPBP20851 252 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 RPL9P32969 192 aaKnown RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 VHLP40337 213 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 MNDAP41218 407 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 STT3AP46977 705 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 POU3F4P49335 361 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 HCCSP53701 268 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 CRISP3P54108 245 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 SPP2Q13103 211 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 TRPC3Q13507 836 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF141Q15928 474 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 LRRC36Q1X8D7 754 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 FAM201AQ5SY85 155 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 GLIPR1L1Q6UWM5 242 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 UNC45BQ8IWX7 931 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 Q8IZM0 81 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms