RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CDK15Q96Q40 435 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 CACNG6Q9BXT2 260 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 PTGES2Q9H7Z7 377 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 IPPKQ9H8X2 491 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 CHODLQ9H9P2 273 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 NMRAL1Q9HBL8 299 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 NGBQ9NPG2 151 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 FBXO34Q9NWN3 711 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 XPR1Q9UBH6 696 aa15.43■□□□□ 0.06
HMGN1-203ENST00000380748 SLC35F4A4IF30 521 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 SHISA9B4DS77 424 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 GMFGO60234 142 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 DLX3O60479 287 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 OPN1LWP04000 364 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 FESP07332 822 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ALDH9A1P49189 494 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 DSCR9P59020 149 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 IRF9Q00978 393 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 PFKFB4Q16877 469 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 GALNT10Q86SR1 603 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 METTL4Q8N3J2 472 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 PIWIL2Q8TC59 973 aaKnown RBP15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ZNF675Q8TD23 568 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ACTRT1Q8TDG2 376 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 DUSP19Q8WTR2 217 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 TM4SF18Q96CE8 201 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ADGRG7Q96K78 797 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ADAD1Q96M93 576 aaKnown RBP15.42■□□□□ 0.06
HMGN1-203ENST00000380748 HDHD5Q9BXW7 423 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 TXNDC16Q9P2K2 825 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 MCTS1Q9ULC4 181 aaKnown RBP15.42■□□□□ 0.06
HMGN1-203ENST00000380748 OR10H1Q9Y4A9 318 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 ZNF780BQ9Y6R6 833 aa15.42■□□□□ 0.06
HMGN1-203ENST00000380748 TP73O15350 636 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 CXCL13O43927 109 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 GUCY1B2O75343 617 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 BCAS2O75934 225 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-203ENST00000380748 PGRP06401 933 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 TUBBP07437 444 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 LTA4HP09960 611 aaKnown RBP15.41■□□□□ 0.06
HMGN1-203ENST00000380748 GFAPP14136 432 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 SLC25A16P16260 332 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 CDH11P55287 796 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 MRPS22P82650 360 aaKnown RBP15.41■□□□□ 0.06
HMGN1-203ENST00000380748 GLYR1Q49A26 553 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-203ENST00000380748 FAM120AOSQ5T036 256 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 SFRP5Q5T4F7 317 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
HMGN1-203ENST00000380748 RAPH1Q70E73 1250 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 MARCH3Q86UD3 253 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 CCDC116Q8IYX3 515 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 OR9A2Q8NGT5 310 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 TRPC4APQ8TEL6 797 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 HSD17B8Q92506 261 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 NXNL1Q96CM4 212 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 HBEGFQ99075 208 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 CPNE1Q99829 537 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 PFDN4Q9NQP4 134 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 SDHAF3Q9NRP4 125 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 GLRX2Q9NS18 164 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 FAIMQ9NVQ4 179 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 AHSPQ9NZD4 102 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 PSME2Q9UL46 239 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 SNX8Q9Y5X2 465 aa15.41■□□□□ 0.06
HMGN1-203ENST00000380748 E7ESA3 106 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 SIX3O95343 332 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-203ENST00000380748 SYNGR4O95473 234 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 CLDN9O95484 217 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 SSTR1P30872 391 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 GP5P40197 560 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 ARL1P40616 181 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-203ENST00000380748 PSPHP78330 225 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 GALNT1Q10472 559 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-203ENST00000380748 ERCC6LQ2NKX8 1250 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 SH2D4BQ5SQS7 431 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 LIPNQ5VXI9 398 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 FRG2Q64ET8 278 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 C11orf71Q6IPW1 123 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 TFAP2EQ6VUC0 442 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 TBC1D1Q86TI0 1168 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-203ENST00000380748 ZBED8Q8IZ13 594 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 FRG2BQ96QU4 278 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 NPAS1Q99742 590 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 UTS2RQ9UKP6 389 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 KCNS2Q9ULS6 477 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 ABCG2Q9UNQ0 655 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 VDAC3Q9Y277 283 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 JRKLQ9Y4A0 524 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 TGP01266 2768 aa15.4■□□□□ 0.06
HMGN1-203ENST00000380748 SYCE1LA8MT33 242 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 OR7A17O14581 309 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 TNFSF11O14788 317 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 CDC25BP30305 580 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 ALDH18A1P54886 795 aaKnown RBP15.39■□□□□ 0.05
HMGN1-203ENST00000380748 ZNF155Q12901 538 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-203ENST00000380748 SGO1Q5FBB7 561 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 AGAP6Q5VW22 663 aa15.39■□□□□ 0.05
HMGN1-203ENST00000380748 NUFIP2Q7Z417 695 aaKnown RBP15.39■□□□□ 0.05
HMGN1-203ENST00000380748 CEP112Q8N8E3 955 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms