RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ADGRF3Q8IZF5 1079 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NANOGP1Q8N7R0 232 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR5H6Q8NGV6 325 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR6F1Q8NGZ6 308 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TSACCQ96A04 125 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 INSM2Q96T92 566 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BTBD1Q9H0C5 482 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TMEM38AQ9H6F2 299 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SPEF1Q9Y4P9 236 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ANKRD61A6NGH8 418 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CACNB4O00305 520 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CMPK1P30085 196 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MEDAGQ5VYS4 303 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC39A5Q6ZMH5 540 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR13C5Q8NGS8 318 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FANK1Q8TC84 345 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KCNN2Q9H2S1 579 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KLHL42Q9P2K6 505 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OTOFQ9HC10 1997 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ANKRD36A6QL64 1941 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HYKKA2RU49 373 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A8MUA0 341 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NFATC1O95644 943 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC1A3P43003 542 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SAXO2Q658L1 398 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ANKRD54Q6NXT1 300 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FRMD1Q8N878 549 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SUN3Q8TAQ9 357 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NEURL3Q96EH8 262 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GPA33Q99795 319 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ALG8Q9BVK2 526 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MS4A8Q9BY19 250 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SEMA4GQ9NTN9 838 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FTSJ1Q9UET6 329 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HMX3A6NHT5 357 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 B4DXG7 233 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BLOC1S5-TXNDC5H3BN57 136 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HOXC11O43248 304 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CSN2P05814 226 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TM4SF4P48230 202 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ARMC6Q6NXE6 501 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FAM111BQ6SJ93 734 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MEIOBQ8N635 442 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GNPDA2Q8TDQ7 276 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC41A3Q96GZ6 507 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 AMDHD1Q96NU7 426 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR7D2Q96RA2 312 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CDCA4Q9BXL8 241 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC25A18Q9H1K4 315 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DPEP2Q9H4A9 486 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C6orf106Q9H6K1 298 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TMEM27Q9HBJ8 222 aa13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MBNL1Q9NR56 388 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GPR55Q9Y2T6 319 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1B-201ENST00000376259 IGLV3-16A0A075B6K0 115 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EDDM13A0A1B0GTR0 161 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DVL2O14641 736 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 B4GALT2O60909 372 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SCO1O75880 301 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 AIFM1O95831 613 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NDUFV2P19404 249 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ACADLP28330 430 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GABRA3P34903 492 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MVDP53602 400 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR10A3P58181 314 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PPP3R1P63098 170 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OC90Q02509 493 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 POU4F3Q15319 338 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BICRALQ6AI39 1079 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LMAN2LQ9H0V9 348 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MGAT4AQ9UM21 535 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NUPL2O15504 423 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MRPS14O60783 128 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 UBXN7O94888 489 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PPP1R3DO95685 299 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ACADMP11310 421 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PRSS45Q7RTY3 260 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RANBP3LQ86VV4 465 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OOSP2Q86WS3 158 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZNF547Q8IVP9 402 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR4C15Q8NGM1 316 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR2L2Q8NH16 312 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SRRQ9GZT4 340 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LOC100509620A0A075B734 347 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FOXE1O00358 373 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GATBO75879 557 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GIFP27352 417 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CRYBB2P43320 205 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CDK3Q00526 305 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms