RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CFHR1Q03591 330 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 MED22Q15528 200 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 TRIM16LQ309B1 348 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF425Q6IV72 752 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 HMGN2P46Q86SG4 172 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 AHCYL2Q96HN2 611 aaKnown RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 GFM1Q96RP9 751 aaKnown RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 TAS2R16Q9NYV7 291 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 IFT52Q9Y366 437 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF780BQ9Y6R6 833 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 KNTC1P50748 2209 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 PROM1O43490 865 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 MT-CO3P00414 261 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 PIPP12273 146 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 NDUFS1P28331 727 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 BTN3A2P78410 334 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 DUSP2Q05923 314 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF404Q494X3 552 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 PODNL1Q6PEZ8 512 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 AVL9Q8NBF6 648 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 KBTBD8Q8NFY9 601 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 WDR36Q8NI36 951 aaKnown RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 NUDT22Q9BRQ3 303 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 FUZQ9BT04 418 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 C3orf14Q9HBI5 128 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 LYARQ9NX58 379 aaKnown RBP14.51□□□□□ -0.09
CCDC40-202ENST00000374876 DAPK2Q9UIK4 370 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 CES1P1Q9UKY3 287 aa14.51□□□□□ -0.09
CCDC40-202ENST00000374876 MED19A0JLT2 244 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-202ENST00000374876 EMC8O43402 210 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 SLITRK5O94991 958 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 LGI1O95970 557 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 FUT5Q11128 374 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 LINC00471Q8N535 108 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 AMER2Q8N7J2 671 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 OR6T1Q8NGN1 323 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 C16orf58Q96GQ5 468 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 OR51E2Q9H255 320 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 MMP27Q9H306 513 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 DSN1Q9H410 356 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 SYNPO2LQ9H987 977 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 SLC25A19Q9HC21 320 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 EQTNQ9NQ60 294 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 NDOR1Q9UHB4 597 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 NINQ8N4C6 2090 aa14.5□□□□□ -0.09
CCDC40-202ENST00000374876 PTPRBP23467 1997 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 A0A1W2PS29 197 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 BTN3A3O00478 584 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 UBXN7O94888 489 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 ADRB1P08588 477 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 DBTP11182 482 aaKnown RBP14.49□□□□□ -0.09
CCDC40-202ENST00000374876 TNNI3P19429 210 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 GRK5P34947 590 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 MC3RP41968 323 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 SLC15A1P46059 708 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 RPS15AP62244 130 aaKnown RBP14.49□□□□□ -0.09
CCDC40-202ENST00000374876 COX10Q12887 443 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 NDUFA9Q16795 377 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 CDCP2Q5VXM1 449 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 C12orf73Q69YU5 71 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF574Q6ZN55 896 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-202ENST00000374876 PAQR7Q86WK9 346 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 NUP43Q8NFH3 380 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR9A2Q8NGT5 310 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR10G6Q8NH81 332 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 RSC1A1Q92681 617 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 PRRC1Q96M27 445 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 MGLLQ99685 303 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 CHCHD6Q9BRQ6 235 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 SCNM1Q9BWG6 230 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 PINK1Q9BXM7 581 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 SRMSQ9H3Y6 488 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 UCK1Q9HA47 277 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 DNAJC27Q9NZQ0 273 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 KLK13Q9UKR3 277 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 CLCA2Q9UQC9 943 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 WDFY3Q8IZQ1 3526 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 LILRA5A6NI73 299 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 CSF2RBP32927 897 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 RGS1Q08116 209 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 PRAMEF8Q5VWM4 474 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 PRAMEF7Q5VXH5 474 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 NIPAL1Q6NVV3 410 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 TMPRSS7Q7RTY8 843 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 TMPRSS12Q86WS5 348 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 RBM12BQ8IXT5 1001 aaKnown RBP14.49□□□□□ -0.09
CCDC40-202ENST00000374876 KCT2Q8NC54 265 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR4K5Q8NGD3 323 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR8J1Q8NGP2 316 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 KLHL6Q8WZ60 621 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 GAL3ST3Q96A11 431 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 ELP4Q96EB1 424 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR7D2Q96RA2 312 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 OR5M11Q96RB7 305 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 SEMA6CQ9H3T2 930 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 SLC13A4Q9UKG4 626 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 WASF3Q9UPY6 502 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 KLK4Q9Y5K2 254 aa14.49□□□□□ -0.09
CCDC40-202ENST00000374876 FUOMA2VDF0 154 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms