RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MCFD2Q8NI22 146 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SDF2Q99470 211 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 C14orf105Q9NVL8 296 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 MRPS18AQ9NVS2 196 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SEC14L4Q9UDX3 406 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 DIMT1Q9UNQ2 313 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CACNA1HO95180 2353 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 THADAQ6YHU6 1953 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 M0R129 80 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 MYL12BO14950 172 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 TPST2O60704 377 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 RAB36O95755 333 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 ENDOUP21128 410 aaKnown RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 CD40LGP29965 261 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 PTGER1P34995 402 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 AVPR1BP47901 424 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 FNTBP49356 437 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 MLLT10P55197 1068 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 DUSP5Q16690 384 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 MBOAT2Q6ZWT7 520 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 RNF113BQ8IZP6 322 aaKnown RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 COX18Q8N8Q8 333 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 TMEM163Q8TC26 289 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 DNASE2BQ8WZ79 361 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 RFKQ969G6 155 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 MCHR1Q99705 422 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 EVA1BQ9NVM1 165 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 CHCHD3Q9NX63 227 aaKnown RBP13.07□□□□□ -0.32
USF1-202ENST00000368020 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 CLCA2Q9UQC9 943 aa13.07□□□□□ -0.32
USF1-202ENST00000368020 CACNA1EQ15878 2313 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 ZNF318Q5VUA4 2279 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 SAGE2PA6NJ88 616 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
USF1-202ENST00000368020 TAF4O00268 1085 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 PRODHO43272 600 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 KIAA0513O60268 411 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 UBXN7O94888 489 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 HSMCR30P0CW71 290 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 ACP2P11117 423 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 NID1P14543 1247 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 MYL12AP19105 171 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 NT5EP21589 574 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 FASLGP48023 281 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 VSX2P58304 361 aaPredicted RBP13.06□□□□□ -0.32
USF1-202ENST00000368020 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
USF1-202ENST00000368020 SHC2P98077 582 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 EFNB1P98172 346 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 RAB40BQ12829 278 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 SPHARQ15513 63 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 SYT14P1Q58G82 188 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 C3orf38Q5JPI3 329 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 IGFN1Q86VF2 1251 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 GKN2Q86XP6 184 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 SDR16C5Q8N3Y7 309 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
USF1-202ENST00000368020 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
USF1-202ENST00000368020 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 LILRA5A6NI73 299 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TLX2O43763 284 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 FGF17O60258 216 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 FCMRO60667 390 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 SULT1C4O75897 302 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 PVRP15151 417 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 BCKDHBP21953 392 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 CDH3P22223 829 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 S100A5P33763 92 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 OMPP47874 163 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 LSSP48449 732 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 LIMK1P53667 647 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 ZNHIT3Q15649 155 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 RPL13AP3Q6NVV1 102 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ZNF836Q6ZNA1 936 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms