RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SERHL2Q9H4I8 314 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 DDX31Q9H8H2 851 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 IMPAD1Q9NX62 359 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CHCHD3Q9NX63 227 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TAS2R7Q9NYW3 318 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 DUSP12Q9UNI6 340 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 MRPS17Q9Y2R5 130 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CDHR4A6H8M9 788 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 EFCAB10A6NFE3 127 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ADAP00813 363 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ITGB2P05107 769 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 PIPP12273 146 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 PSMB5P28074 263 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CNR2P34972 360 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 DRD3P35462 400 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 EIF2DP41214 584 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TAS2R38P59533 333 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 RPS3AP61247 264 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CYP4F2P78329 520 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 OLR1P78380 273 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ILKQ13418 452 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 SEC23BQ15437 767 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 WSCD2Q2TBF2 565 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ARMCX4Q5H9R4 360 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 KIAA1161Q6NSJ0 714 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 PLEKHG7Q6ZR37 379 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 MED25Q71SY5 747 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF367Q7RTV3 350 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CACUL1Q86Y37 369 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 LACC1Q8IV20 430 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 OR4D11Q8NGI4 311 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 SMPDL3AQ92484 453 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 PRAP1Q96NZ9 151 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 QRFPRQ96P65 431 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 WFDC6Q9BQY6 131 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TEX101Q9BY14 249 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 ACSS1Q9NUB1 689 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 C5AR2Q9P296 337 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 IFT52Q9Y366 437 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 A0A0C4DFX4 3053 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 A0A0A6YYD5 115 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 IGKV1-8A0A0C4DH67 115 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 IGLON5A6NGN9 336 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TAF4O00268 1085 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ZSCAN9O15535 394 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 LCMT2O60294 686 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 DOK2O60496 412 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ADAM23O75077 832 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ALOX5P09917 674 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 DDX5P17844 614 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ELAVL4P26378 380 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SNRPGP62308 76 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 DSG4Q86SJ6 1040 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 NUDT13Q86X67 352 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 AMER3Q8N944 861 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 FAM46DQ8NEK8 389 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 CREB3L4Q8TEY5 395 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SMG7Q92540 1137 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 UCN3Q969E3 161 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ZBED6CLQ96FA7 236 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF354BQ96LW1 612 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 MS4A7Q9GZW8 240 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 AICDAQ9GZX7 198 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 OR51E2Q9H255 320 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TEX10Q9NXF1 929 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 THAP10Q9P2Z0 257 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 UGT2A1Q9Y4X1 527 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SNX11Q9Y5W9 270 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 AGAP5A6NIR3 686 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 C5orf58C9J3I9 102 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SYT5O00445 386 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 NDUFS4O43181 175 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ZW10O43264 779 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 PDE9AO76083 593 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 PCCBP05166 539 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TRA2BP62995 288 aaKnown RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 CSNK1G2P78368 415 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 DMPKQ09013 629 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 HSPB3Q12988 150 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 LEXMQ3ZCV2 418 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SOWAHCQ53LP3 525 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 AGAP7PQ5VUJ5 663 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 PLAG1Q6DJT9 500 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 FAM92BQ6ZTR7 304 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 BMP8AQ7Z5Y6 402 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SLC44A2Q8IWA5 706 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 CCDC28AQ8IWP9 274 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 C12orf76Q8N812 135 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 DTX3Q8N9I9 347 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TP53I13Q8NBR0 393 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-202ENST00000360642 PHOSPHO2Q8TCD6 241 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SUSD6Q92537 303 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 SMARCD2Q92925 531 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms