RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 LBX1P52954 281 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CTXN1P60606 82 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 LEG1Q6P5S2 330 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 TMPPEQ6ZT21 453 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CLEC14AQ86T13 490 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ITFG2Q969R8 447 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 TP63Q9H3D4 680 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 GPR39O43194 453 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 IFNA5P01569 189 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 GCAP28676 217 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ADH7P40394 386 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 KCNJ5P48544 419 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 FOXA1P55317 472 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 PER3P56645 1201 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 COL28A1Q2UY09 1125 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 C18orf21Q32NC0 220 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 NADSYN1Q6IA69 706 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 UBTD2Q8WUN7 234 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 MAL2Q969L2 176 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 UNKLQ9H9P5 680 aaKnown RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PRAMEF26H0Y7S4 382 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 E2F3O00716 465 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 UPK1BO75841 260 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 IFNA1P01562 189 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CDK1P06493 297 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CD63P08962 238 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 AHRP35869 848 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 EFR3AQ14156 821 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 FAM69AQ5T7M9 428 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 BCL2L15Q5TBC7 163 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM151AQ8N4L1 468 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CREB3L4Q8TEY5 395 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM239Q8WW34 195 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 APOOQ9BUR5 198 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 HCFC1R1Q9NWW0 138 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TAS2R3Q9NYW6 316 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 SRPK3Q9UPE1 567 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PIAS3Q9Y6X2 628 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 MROH6A6NGR9 719 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 C12orf71A8MTZ7 269 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 LYRM1O43325 122 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 OR7A10O76100 309 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CDK2P24941 298 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 MAGEA3P43357 314 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 WDR5P61964 334 aaKnown RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 METTL11BQ5VVY1 283 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ALKAL1Q6UXT8 129 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 SLC15A4Q8N697 577 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 GPR148Q8TDV2 347 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ZDHHC1Q8WTX9 485 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 NEIL2Q969S2 332 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 WDR77Q9BQA1 342 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 THEGLP0DJG4 465 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 IL1RNP18510 177 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 GNRHRP30968 328 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ETV6P41212 452 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 VIPR2P41587 438 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 SF3A2Q15428 464 aaKnown RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TLDC1Q6P9B6 456 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PHC2Q8IXK0 858 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 GPR137CQ8N3F9 429 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CHPT1Q8WUD6 406 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 GTF2H4Q92759 462 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PMM1Q92871 262 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TOX2Q96NM4 488 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CDC123O75794 336 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 PRSS3P35030 304 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 DAP3P51398 398 aaKnown RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TAS2R31P59538 309 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 NSDHLQ15738 373 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 CCSAPQ6IQ19 270 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 TTLL10Q6ZVT0 673 aa11.09□□□□□ -0.63
COL9A1-202ENST00000357250 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
COL9A1-202ENST00000357250 FBXO27Q8NI29 283 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms