RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 BAIAP2Q9UQB8 552 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 CD63P08962 238 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PNMTP11086 282 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 BMP2P12643 396 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 DCTP40126 519 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 HNRNPA0Q13151 305 aaKnown RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 OR5M10Q6IEU7 315 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 FIP1L1Q6UN15 594 aaKnown RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 GPALPP1Q8IXQ4 340 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 OR51L1Q8NGJ5 315 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 BTBD2Q9BX70 525 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 MS4A8Q9BY19 250 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 C1GALT1Q9NS00 363 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 ACSS1Q9NUB1 689 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 EURLQ9NYK6 297 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 GPR83Q9NYM4 423 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 TBC1D29Q9UFV1 150 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 UBFD1O14562 309 aaKnown RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 TNFRSF10CO14798 259 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 NPPBP16860 134 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PYCR3Q53H96 274 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 C18orf63Q68DL7 685 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 SHFQ7M4L6 423 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 MAFAQ8NHW3 353 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 TMEM239Q8WW34 195 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 CD93Q9NPY3 652 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PRKRAO75569 313 aaKnown RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 ZFAND5O76080 213 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PKLRP30613 574 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 ALG10Q5BKT4 473 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 TMEM17Q86X19 198 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 ACBD7Q8N6N7 88 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 CEP76Q8TAP6 659 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 THRSPQ92748 146 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 CCNL2Q96S94 520 aaPredicted RBP14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PKMYT1Q99640 499 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 VNN3Q9NY84 501 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF221Q9UK13 617 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 DHDHQ9UQ10 334 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 PLEKHA6Q9Y2H5 1048 aa14.01□□□□□ -0.17
COL17A1-201ENST00000353479 YKT6O15498 198 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 SIGLEC6O43699 453 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 NDUFB2O95178 105 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 SELPLGQ14242 412 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 AKIRIN2Q53H80 203 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 CTRCQ99895 268 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 SLC35A3Q9Y2D2 325 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 VASPP50552 380 aaPredicted RBP14□□□□□ -0.17
COL17A1-201ENST00000353479 ARHGDIBP52566 201 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 PPP2CBP62714 309 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 PPP2CAP67775 309 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 CEACAM19Q7Z692 300 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 LYSMD1Q96S90 227 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 TRBV2A0A0J9YWF9 115 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 A0A1W2PPW3 197 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 FAM171A2A8MVW0 826 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 AP1G1O43747 822 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 OPN1LWP04000 364 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 FUT1P19526 365 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 BCL6P41182 706 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 RIDAP52758 137 aaKnown RBP14□□□□□ -0.17
COL17A1-201ENST00000353479 CSNK1G2P78368 415 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 RAB39AQ14964 217 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 FAM189A2Q15884 450 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF404Q494X3 552 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 ZFP69Q49AA0 526 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 C14orf28Q4W4Y0 310 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 HSD17B12Q53GQ0 312 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 ZFP41Q8N8Y5 198 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 NEIL3Q8TAT5 605 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 TLCD2A6NGC4 264 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 MTNR1AP48039 350 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 FOXK1P85037 733 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
COL17A1-201ENST00000353479 KIR3DX1Q9H7L2 352 aa14□□□□□ -0.17
COL17A1-201ENST00000353479 SLC5A10A0PJK1 596 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CTSLP07711 333 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 NUDT7P0C024 238 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 BMP1P13497 986 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 DPTQ07507 201 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 MAD2L1BPQ15013 274 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SEC23BQ15437 767 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CWF19L1Q69YN2 538 aaKnown RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 Q6ZSR9 355 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 IQCF2Q8IXL9 164 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 MZB1Q8WU39 189 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CRISPLD2Q9H0B8 497 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SP140LQ9H930 580 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ACAD8Q9UKU7 415 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 DCDP81605 110 aaKnown RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 HTRA4P83105 476 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ADAM15Q13444 863 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ANKDD1AQ495B1 522 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 TMEM196Q5HYL7 178 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 GLT8D1Q68CQ7 371 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 MARVELD2Q8N4S9 558 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ZSCAN4Q8NAM6 433 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CYB561A3Q8NBI2 242 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 MGLLQ99685 303 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 PIGUQ9H490 435 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms