RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GDF7Q7Z4P5 450 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 SIRT6Q8N6T7 355 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 OR51G2Q8NGK0 314 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 ZNF764Q96H86 408 aaPredicted RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 MCHR1Q99705 422 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 ARHGDIGQ99819 225 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 SOSTQ9BQB4 213 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 PPIL3Q9H2H8 161 aaKnown RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 WDR26Q9H7D7 661 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 GIMAP4Q9NUV9 329 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 TRDV1A0A1B0GX56 115 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 CASC3O15234 703 aaKnown RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 HYAL3O43820 417 aaPredicted RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 EVX1P49640 407 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 ST3GAL3Q11203 375 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 SMARCD3Q6STE5 483 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 PLET1Q6UQ28 207 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 IL20RBQ6UXL0 311 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 PLEKHM3Q6ZWE6 761 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 NANOGNBQ7Z5D8 188 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 LINC00471Q8N535 108 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 YIPF7Q8N8F6 280 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 POGLUT1Q8NBL1 392 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 C19orf18Q8NEA5 215 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 PIGXQ8TBF5 258 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 ZNF681Q96N22 645 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 CBLCQ9ULV8 474 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 A0A1W2PP55 124 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SYNDIG1LA6NDD5 238 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 MAP2K3P46734 347 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 RGS8P57771 180 aaPredicted RBP16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 LRRC32Q14392 662 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 EOGTQ5NDL2 527 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 FAM27D1Q5T7N8 215 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 AGBL4Q5VU57 503 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TRIQKQ629K1 86 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 HDAC8Q9BY41 377 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM74BQ9NUR3 256 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 ZFR2Q9UPR6 939 aaKnown RBP16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 GPSM3Q9Y4H4 160 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 ALG5Q9Y673 324 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 LTBP2Q14767 1821 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TRBV23OR9-2A0A075B6M9 112 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 GSAPA4D1B5 854 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 C1QTNF3-AMACRE9PGA6 284 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 EMC8O43402 210 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 PROM1O43490 865 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SCO2O43819 266 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 PRG2P13727 222 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TBXA2RP21731 343 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 OR2L3Q8NG85 312 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 AP3S1Q92572 193 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 CDS1Q92903 461 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 UPRTQ96BW1 309 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 GIMAP5Q96F15 307 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 HCAR1Q9BXC0 346 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TEX101Q9BY14 249 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 C11orf49Q9H6J7 331 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC7A7Q9UM01 511 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 ASGR2P07307 311 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 ALAS2P22557 587 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 MPIP34949 423 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 DUSP6Q16828 381 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 THOC7Q6I9Y2 204 aaKnown RBP16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 PLBD1Q6P4A8 553 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 BHLHB9Q6PI77 547 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 OR2L5Q8NG80 312 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC41A3Q96GZ6 507 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 WACQ9BTA9 647 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 IL20Q9NYY1 176 aa16.9■□□□□ 0.3
PTP4A3-202ENST00000349124 SCN2AQ99250 2005 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 KIF26AQ9ULI4 1882 aaPredicted RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 SNTNA6NMZ2 147 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 GKN3PP0CG01 181 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 MYOGP15173 224 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 PKLRP30613 574 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 MAT2AP31153 395 aaKnown RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 PPP3R1P63098 170 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 PRR5P85299 388 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 ID2Q02363 134 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 CSTF1Q05048 431 aaKnown RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 SYCE2Q6PIF2 218 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 C7orf57Q8NEG2 295 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 OR56A1Q8NGH5 318 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 TRIM45Q9H8W5 580 aaPredicted RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 ACSL5Q9ULC5 683 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 AKR7A2O43488 359 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 LANCL1O43813 399 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 CPNE3O75131 537 aaKnown RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 ZGLP1P0C6A0 271 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 IFNGR2P38484 337 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 SNRPD2P62316 118 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms