RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ZNF235Q14590 738 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SEC23BQ15437 767 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SYT14P1Q58G82 188 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CTSL3PQ5NE16 218 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 DCST1Q5T197 706 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SPOUT1Q5T280 376 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 EEF1A1P5Q5VTE0 462 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ADNP2Q6IQ32 1131 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 NOXRED1Q6NXP6 359 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SLC30A6Q6NXT4 461 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CDC73Q6P1J9 531 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 PAQR6Q6TCH4 344 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CEACAM20Q6UY09 585 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 GLDNQ6ZMI3 551 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 GLT6D1Q7Z4J2 308 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CAMKMTQ7Z624 323 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 LHFPL3Q86UP9 236 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 PNPLA1Q8N8W4 532 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 BPIFCQ8NFQ6 507 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 OR14A16Q8NHC5 309 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ARRDC2Q8TBH0 407 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SMARCD1Q96GM5 515 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ART5Q96L15 291 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CMTM3Q96MX0 182 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF582Q96NG8 517 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 COPS8Q99627 209 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 GPR20Q99678 358 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 FDXACB1Q9BRP7 624 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 TINF2Q9BSI4 451 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 FUZQ9BT04 418 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 DUSP26Q9BV47 211 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CHIAQ9BZP6 476 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ZYG11BQ9C0D3 744 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 RNF122Q9H9V4 155 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SEBOXQ9HB31 216 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 RASL12Q9NYN1 266 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 NFKBIL1Q9UBC1 381 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 FBXL3Q9UKT7 428 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF214Q9UL59 606 aaPredicted RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 CARHSP1Q9Y2V2 147 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 BACE2Q9Y5Z0 518 aa7.65□□□□□ -1.18
ATG4A-201ENST00000343524 TCF20Q9UGU0 1960 aaKnown RBP7.65□□□□□ -1.18
ATG4A-201ENST00000343524 A0A0D9SG52 128 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 C1orf226A1L170 272 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ANKRD61A6NGH8 418 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 HEPACAM2A8MVW5 462 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 C1orf196B1AJZ1 125 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM229AB2RXF0 380 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ARPC5O15511 151 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 HCRTO43612 131 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 NDUFS6O75380 124 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 STK16O75716 305 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 BEST1O76090 585 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SIX6O95475 246 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PDYNP01213 254 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 EIF4EP06730 217 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TXNP10599 105 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SELLP14151 372 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SNRPBP14678 240 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TYRP1P17643 537 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 AMD1P17707 334 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GSTM3P21266 225 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PTAFRP25105 342 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CCND3P30281 292 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CD79BP40259 229 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 EIF2S3P41091 472 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CCR9P51686 369 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CAPZA1P52907 286 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MAXP61244 160 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 KLF9Q13886 244 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SF1Q15637 639 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MPPED2Q15777 294 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ARMC12Q5T9G4 340 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF626Q68DY1 528 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF660Q6AZW8 331 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 C3orf33Q6P1S2 294 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ALKAL1Q6UXT8 129 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CD300LDQ6UXZ3 194 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 UNC5DQ6UXZ4 953 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CXXC5Q7LFL8 322 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SLC16A13Q7RTY0 426 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 NKAIN4Q8IVV8 208 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LRRC56Q8IYG6 542 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 OR52N2Q8NGI0 321 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 THAP6Q8TBB0 222 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TCTEX1D2Q8WW35 142 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PNPLA2Q96AD5 504 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LRR1Q96L50 414 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 FCRL2Q96LA5 508 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 UTP23Q9BRU9 249 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMED9Q9BVK6 235 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 JAM3Q9BX67 310 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TEX12Q9BXU0 123 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 QRSL1Q9H0R6 528 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TBC1D17Q9HA65 648 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms