RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 RASD1Q9Y272 281 aa20.96■□□□□ 0.95
TRIM28-202ENST00000341753 PCYT1BQ9Y5K3 369 aaPredicted RBP20.96■□□□□ 0.95
TRIM28-202ENST00000341753 H7BY64 318 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 TBXA2RP21731 343 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 TALDO1P37837 337 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 ANGPT1Q15389 498 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF658BQ4V348 819 aaPredicted RBP20.95■□□□□ 0.94
TRIM28-202ENST00000341753 TCEAL5Q5H9L2 206 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 AADACL4Q5VUY2 407 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF322Q6U7Q0 402 aaPredicted RBP20.95■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF782Q6ZMW2 699 aaPredicted RBP20.95■□□□□ 0.94
TRIM28-202ENST00000341753 FAM83HQ6ZRV2 1179 aaPredicted RBP20.95■□□□□ 0.94
TRIM28-202ENST00000341753 RRM2BQ7LG56 351 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 UBE2E3Q969T4 207 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 C16orf58Q96GQ5 468 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 PRAP1Q96NZ9 151 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 OSGEPL1Q9H4B0 414 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 HEXA-AS1Q9H8Q6 139 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 MED20Q9H944 212 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 CDK2AP1O14519 115 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 OR7A10O76100 309 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 RAF1P04049 648 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 CD3GP09693 182 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 BTG1P62324 171 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 VRK2Q86Y07 508 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 NKAIN4Q8IVV8 208 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 OR5M3Q8NGP4 307 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 GNPDA2Q8TDQ7 276 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 MACROD1Q9BQ69 325 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 MS4A8Q9BY19 250 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 GHITMQ9H3K2 345 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 EQTNQ9NQ60 294 aa20.95■□□□□ 0.94
TRIM28-202ENST00000341753 A0A1W2PS29 197 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 LINC00862A6NCI5 91 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 PIP5K1CO60331 668 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 EFCAB14O75071 495 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ERAL1O75616 437 aaKnown RBP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 DHFRP00374 187 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 NAT1P18440 290 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 PTBP1P26599 531 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 NCBP2P52298 156 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 STXBP1P61764 594 aaKnown RBP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ARMC5Q96C12 935 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 CHFRQ96EP1 664 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 MRGPRX3Q96LB0 322 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 LRRC3BQ96PB8 259 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 BTBD1Q9H0C5 482 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ZDHHC4Q9NPG8 344 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 CYSLTR2Q9NS75 346 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 MRPS7Q9Y2R9 242 aaKnown RBP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 PLXNA2O75051 1894 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ANTXRLA6NF34 631 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 SURF4O15260 269 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 RNF13O43567 381 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 PI15O43692 258 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 POP7O75817 140 aaKnown RBP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 TIMP1P01033 207 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 TRHRP34981 398 aaPredicted RBP20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF81P51508 661 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 LYPD4Q6UWN0 246 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 COMMD7Q86VX2 200 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF547Q8IVP9 402 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 TNFRSF10DQ9UBN6 386 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 POLHQ9Y253 713 aa20.94■□□□□ 0.94
TRIM28-202ENST00000341753 LILRB5O75023 590 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 TOXO94900 526 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 C8orf89P0DMQ9 161 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 EPCAMP16422 314 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 AHCYP23526 432 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 GIFP27352 417 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 CCR6P51684 374 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 TSPAN31Q12999 210 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 SMARCD3Q6STE5 483 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 CPOQ8IVL8 374 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 LSMEM1Q8N8F7 131 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 CEP76Q8TAP6 659 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 ZDHHC5Q9C0B5 715 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 OR51J1Q9H342 316 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 NT5DC2Q9H857 520 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 SZT2Q5T011 3432 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 PTPRSQ13332 1948 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 LTBP2Q14767 1821 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 TEX13CA0A0J9YWL9 993 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 CHST10O43529 356 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 RGS9O75916 674 aaPredicted RBP20.93■□□□□ 0.94
TRIM28-202ENST00000341753 ANXA3P12429 323 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 AHRP35869 848 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 GRASPQ7Z6J2 395 aaPredicted RBP20.93■□□□□ 0.94
TRIM28-202ENST00000341753 RFKQ969G6 155 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 SCMH1Q96GD3 660 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 AMDHD1Q96NU7 426 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 ARPC5LQ9BPX5 153 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 HINT3Q9NQE9 182 aaKnown RBP20.93■□□□□ 0.94
TRIM28-202ENST00000341753 KLHL1Q9NR64 748 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 ZNF224Q9NZL3 707 aa20.93■□□□□ 0.94
TRIM28-202ENST00000341753 TPOP07202 933 aa20.92■□□□□ 0.94
TRIM28-202ENST00000341753 SOX9P48436 509 aa20.92■□□□□ 0.94
TRIM28-202ENST00000341753 PITPNBP48739 271 aa20.92■□□□□ 0.94
TRIM28-202ENST00000341753 ARL9Q6T311 187 aa20.92■□□□□ 0.94
TRIM28-202ENST00000341753 MRGPREQ86SM8 312 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms