RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SNPHO15079 494 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 SCO2O43819 266 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TRAPPC6AO75865 159 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 UTS2O95399 124 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 IGHG3P01860 377 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 C1QCP02747 245 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 GSNP06396 782 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TROVE2P10155 538 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 ABOP16442 354 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 ELAVL4P26378 380 aaKnown RBP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CHI3L1P36222 383 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TOMM20Q15388 145 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TIGD2Q4W5G0 525 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 C1QL3Q5VWW1 255 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 SAXO2Q658L1 398 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 OR5M10Q6IEU7 315 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CGB2Q6NT52 195 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 ARHGAP11AQ6P4F7 1023 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CLEC18BQ6UXF7 455 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 ZNF621Q6ZSS3 439 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TRILQ7L0X0 811 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 FUNDC1Q8IVP5 155 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CLEC18CQ8NCF0 446 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 NEURL3Q96EH8 262 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 UBQLN3Q9H347 655 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 LDAHQ9H6V9 325 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 QPCTLQ9NXS2 382 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 CCDC167Q9P0B6 97 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 ABCG2Q9UNQ0 655 aa13.92□□□□□ -0.18
UBE3B-201ENST00000340074 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-201ENST00000340074 TRGV8A0A0C4DH27 118 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 C17orf51A8MQB3 221 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 RFXANKO14593 260 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ADAM10O14672 748 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 LRRTM2O43300 516 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 SOX30O94993 753 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ZIC2O95409 532 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 PTPN6P29350 595 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 PTGS2P35354 604 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ATP4BP51164 291 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 RCAN2Q14206 197 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 SQLEQ14534 574 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 DCST2Q5T1A1 773 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 DNAJC14Q6Y2X3 702 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 Q6ZPB1 254 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 MSANTD1Q6ZTZ1 278 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 FAM26EQ8N5C1 309 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 TRIML2Q8N7C3 387 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 OR4C3Q8NH37 302 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ITCHQ96J02 903 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 TMEM120AQ9BXJ8 343 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 OR51I1Q9H343 314 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 RMND5AQ9H871 391 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 SLC6A13Q9NSD5 602 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-201ENST00000340074 TINAGQ9UJW2 476 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 TRIM33Q9UPN9 1127 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 PCNX1Q96RV3 2341 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 DOPEY2Q9Y3R5 2298 aa13.91□□□□□ -0.18
UBE3B-201ENST00000340074 TRGV5A0A0B4J1U4 118 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 A0A1B0GVC2 190 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 B4DXG7 233 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 NR5A2O00482 541 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 SUSD5O60279 629 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 AGFG2O95081 481 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 HPNP05981 417 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 CD1EP15812 388 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 CA7P43166 264 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 TRPC1P48995 793 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 IRX1P78414 480 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-201ENST00000340074 STX5Q13190 355 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 UBAP2LQ14157 1087 aaKnown RBP13.9□□□□□ -0.18
UBE3B-201ENST00000340074 C3AR1Q16581 482 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 C4orf17Q53FE4 359 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 AGKQ53H12 422 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 TNFAIP8L2Q6P589 184 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-201ENST00000340074 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 APOOLQ6UXV4 268 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 FJX1Q86VR8 437 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 PLCZ1Q86YW0 608 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 ZNF317Q96PQ6 595 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-201ENST00000340074 G6PC3Q9BUM1 346 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 TBL1XR1Q9BZK7 514 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 SLC6A15Q9H2J7 730 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 EXO5Q9H790 373 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 ACKR4Q9NPB9 350 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 FBXL2Q9UKC9 423 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 PCDHGB3Q9Y5G1 929 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 HEATR5AQ86XA9 2040 aa13.9□□□□□ -0.18
UBE3B-201ENST00000340074 A0A1B0GUH1 482 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms