RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SNX29P2Q8IUI4 249 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 NKAIN4Q8IVV8 208 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 TDHQ8IZJ6 230 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 PIGXQ8TBF5 258 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 MND1Q9BWT6 205 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 STARD5Q9NSY2 213 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 A0A087WV62 115 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 CENPVL1A0A0U1RR11 272 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 DSCR3O14972 297 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 HCRTR1O43613 425 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 THY1P04216 161 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 SCG5P05408 212 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 TYRP1P17643 537 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 NT5EP21589 574 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 DUSP8Q13202 625 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 GPR68Q15743 365 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 RNLSQ5VYX0 342 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 PLEKHG7Q6ZR37 379 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 RASSF6Q6ZTQ3 369 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 CA13Q8N1Q1 262 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 OR8D4Q8NGM9 314 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 ACOT11Q8WXI4 607 aaPredicted RBP16.22■□□□□ 0.19
DDX28-201ENST00000332395 SLC41A3Q96GZ6 507 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 ZNF582Q96NG8 517 aaPredicted RBP16.22■□□□□ 0.19
DDX28-201ENST00000332395 GAS2L1Q99501 681 aaPredicted RBP16.22■□□□□ 0.19
DDX28-201ENST00000332395 ZNF350Q9GZX5 532 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 SAP130Q9H0E3 1048 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 WSB2Q9NYS7 404 aaPredicted RBP16.22■□□□□ 0.19
DDX28-201ENST00000332395 SLCO1B1Q9Y6L6 691 aa16.22■□□□□ 0.19
DDX28-201ENST00000332395 AGAP5A6NIR3 686 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 PLOD3O60568 738 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 UBXN7O94888 489 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 OR5F1O95221 314 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 MAP4K2Q12851 820 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 SPHARQ15513 63 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 DECR1Q16698 335 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 EXOSC6Q5RKV6 272 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 GDF7Q7Z4P5 450 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 NANOGP1Q8N7R0 232 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 MSANTD3Q96H12 275 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 HHATLQ9HCP6 504 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 CCDC59Q9P031 241 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 A3GALT2U3KPV4 340 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 SGK494L7N484 410 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 THBS1P07996 1170 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 DNASE1L3Q13609 305 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 PRICKLE4Q2TBC4 344 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 DCST2Q5T1A1 773 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 MRGPREQ86SM8 312 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 ZNF619Q8N2I2 560 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 CDRT4Q8N9R6 151 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 TMEM163Q8TC26 289 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 ZDHHC1Q8WTX9 485 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 CTRCQ99895 268 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 CDADC1Q9BWV3 514 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 C6orf62Q9GZU0 229 aaPredicted RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 NXF2Q9GZY0 626 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 RACGAP1Q9H0H5 632 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 FAM60AQ9NP50 221 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 MAT2BQ9NZL9 334 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 TESQ9UGI8 421 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 POMT2Q9UKY4 750 aa16.21■□□□□ 0.19
DDX28-201ENST00000332395 DIMT1Q9UNQ2 313 aaKnown RBP16.21■□□□□ 0.19
DDX28-201ENST00000332395 A0A1W2PPC4 97 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 B4DGG1 531 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 KIAA0513O60268 411 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 ST6GAL1P15907 406 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 S100A1P23297 94 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 FPR3P25089 353 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 SOX3P41225 446 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 BLKP51451 505 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 SELENBP1Q13228 472 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 DEFB110Q30KQ9 67 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 ARMC6Q6NXE6 501 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 C11orf74Q86VG3 221 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 PARGQ86W56 976 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 NRMQ8IXM6 262 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 COX18Q8N8Q8 333 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 PROKR2Q8NFJ6 384 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 OR52I1Q8NGK6 324 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 TMEM255BQ8WV15 326 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 PIK3R3Q92569 461 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 SEMA6CQ9H3T2 930 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 DUSP22Q9NRW4 184 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 C2orf42Q9NWW7 574 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 SATB2Q9UPW6 733 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 CLCA2Q9UQC9 943 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 MYL12BO14950 172 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 STX11O75558 287 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 RAB36O95755 333 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 HBQ1P09105 142 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 ZNF136P52737 540 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 MGAT2Q10469 447 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 EXOSC7Q15024 291 aaKnown RBP16.2■□□□□ 0.18
DDX28-201ENST00000332395 MAPK14Q16539 360 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 CLEC12AQ5QGZ9 265 aa16.2■□□□□ 0.18
DDX28-201ENST00000332395 PAQR6Q6TCH4 344 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms