RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CNIH2Q6PI25 160 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CD300LDQ6UXZ3 194 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 SETD6Q8TBK2 473 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 PITHD1Q9GZP4 211 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM25AB3EWG3 89 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM25CB3EWG5 89 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM25GB3EWG6 89 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 ADH1BP00325 375 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 GKN3PP0CG01 181 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 C5AR1P21730 350 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 PEBP1P30086 187 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 ZIC1Q15915 447 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 RPE65Q16518 533 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM64Q6YI46 380 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 NEIL3Q8TAT5 605 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 DIO2Q92813 273 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC41A3Q96GZ6 507 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 FYTTD1Q96QD9 318 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 BTBD1Q9H0C5 482 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 PROM1O43490 865 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CPN2P22792 545 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 STXBP1P61764 594 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 RPS7P62081 194 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 XKRXQ6PP77 449 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF614Q8N883 585 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 OR7G2Q8NG99 324 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 AP3S1Q92572 193 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 RANGRFQ9HD47 186 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 NDRG2Q9UN36 371 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 GRIP1Q9Y3R0 1128 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
ATP2C1-201ENST00000328560 CHD9Q3L8U1 2897 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 CENPVL1A0A0U1RR11 272 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 GSAPA4D1B5 854 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 DVL2O14641 736 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 DNAJB6O75190 326 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC2A2P11168 524 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 PSKH1P11801 424 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 MYL9P24844 172 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 GCGRP47871 477 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 OMPP47874 163 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 GAS1P54826 345 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 RAB25P57735 213 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 P2RY14Q15391 338 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM214AQ32MH5 1076 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 RASSF6Q6ZTQ3 369 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 GDF7Q7Z4P5 450 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 SHISA5Q8N114 240 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 RAB11FIP5Q9BXF6 653 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC17A9Q9BYT1 436 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 FGF22Q9HCT0 170 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 A0A1B0GVC2 190 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 A6NIN4 97 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 POLR1CO15160 346 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 EML2O95834 649 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 RPS21P63220 83 aaKnown RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 BNC1Q01954 994 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 TPBGQ13641 420 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 GLYR1Q49A26 553 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 MRM1Q6IN84 353 aaKnown RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 PAMR1Q6UXH9 720 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 Q8N402 240 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 SRFBP1Q8NEF9 429 aaKnown RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 SFXN5Q8TD22 340 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 ACOT11Q8WXI4 607 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 RFKQ969G6 155 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 WDFY2Q96P53 400 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 TRIM45Q9H8W5 580 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 PAQR5Q9NXK6 330 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 TNFRSF10DQ9UBN6 386 aa13.13□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 GABRA5P31644 462 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ERVK-21P61565 698 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 QPRTQ15274 297 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 BCL2A1Q16548 175 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 FCRLBQ6BAA4 426 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PLET1Q6UQ28 207 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms