RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 GADD45AP24522 165 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 OPRL1P41146 370 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SLC15A1P46059 708 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 FASLGP48023 281 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 PCYT1AP49585 367 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 RGS6P49758 472 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 RAB38P57729 211 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 MAT1AQ00266 395 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 MGAT2Q10469 447 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DUSP8Q13202 625 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DGUOKQ16854 277 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DEFB133Q30KQ1 61 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SOWAHCQ53LP3 525 aaPredicted RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 C16orf87Q6PH81 154 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 ZC3H14Q6PJT7 736 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 GKN2Q86XP6 184 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 KIF18BQ86Y91 864 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 VWA5B2Q8N398 1253 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 FAM174AQ8TBP5 190 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 RNF217Q8TC41 542 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 BORCS5Q969J3 196 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SLC41A3Q96GZ6 507 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 RBM18Q96H35 190 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 LRR1Q96L50 414 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SCN2AQ99250 2005 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DSN1Q9H410 356 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 SLC25A19Q9HC21 320 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 DUSP22Q9NRW4 184 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 KLHL3Q9UH77 587 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 FBXL21Q9UKT6 434 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 MRPS17Q9Y2R5 130 aaKnown RBP7.05□□□□□ -1.28
IFT88-201ENST00000319980 SPTBP11277 2137 aa7.05□□□□□ -1.28
IFT88-201ENST00000319980 A0A1W2PR77 199 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 C19orf67A6NJJ6 358 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SRPX2O60687 465 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 MED26O95402 600 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 PROS1P07225 676 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CKMT1AP12532 417 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 PRG2P13727 222 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CAPZBP47756 277 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SMSP52788 366 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 STX4Q12846 297 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 IRF3Q14653 427 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 MAMSTRQ6ZN01 415 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SLC46A3Q7Z3Q1 461 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 GDF7Q7Z4P5 450 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ADCK1Q86TW2 530 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 NRMQ8IXM6 262 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SLC34A3Q8N130 599 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ZNF619Q8N2I2 560 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 OR52R1Q8NGF1 315 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TEX47Q8TBZ9 253 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 DYNC2LI1Q8TCX1 351 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TMEM255BQ8WV15 326 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CTHRC1Q96CG8 243 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ARSGQ96EG1 525 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CRELD1Q96HD1 420 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 HSPA12BQ96MM6 686 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 MGLLQ99685 303 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TBC1D23Q9NUY8 699 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 IL20RAQ9UHF4 553 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CLEC2DQ9UHP7 191 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 KCNE5Q9UJ90 142 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SLC7A7Q9UM01 511 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 GPR52Q9Y2T5 361 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 RPL36Q9Y3U8 105 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 GXYLT2A0PJZ3 443 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ICMTO60725 284 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SLC35E2P0CK97 266 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 DBTP11182 482 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 GRK5P34947 590 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 GPR4P46093 362 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 OMPP47874 163 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CSNK1EP49674 416 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 GFERP55789 205 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 EEF1A1P68104 462 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 CDK5Q00535 292 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ZNF91Q05481 1191 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TSPAN31Q12999 210 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 MRPL2Q5T653 305 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 MFSD4BQ5TF39 518 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 SLC27A4Q6P1M0 643 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ARHGAP22Q7Z5H3 698 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SIX5Q8N196 739 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ARHGEF39Q8N4T4 335 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 FAM26EQ8N5C1 309 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 METTL27Q8N6F8 245 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 ZNF614Q8N883 585 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 C9orf43Q8TAL5 461 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 PIGXQ8TBF5 258 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 GNPDA2Q8TDQ7 276 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ACOT11Q8WXI4 607 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 NR4A3Q92570 626 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 HLA-CQ95604 372 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms