RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 GDF7Q7Z4P5 450 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 NRMQ8IXM6 262 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 PRSS58Q8IYP2 241 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 ALDH16A1Q8IZ83 802 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 MYDGFQ969H8 173 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 SLC38A4Q969I6 547 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 RBM18Q96H35 190 aaKnown RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 SPACA7Q96KW9 195 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 CCNB1IP1Q9NPC3 277 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 KLHL28Q9NXS3 571 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 CALML5Q9NZT1 146 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 DHCR7Q9UBM7 475 aaKnown RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 NDOR1Q9UHB4 597 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 LMO7DNF2Z398 122 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 PLOD3O60568 738 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 GRK5P34947 590 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 MAGEA8P43361 318 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 RELAQ04206 551 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 MED22Q15528 200 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 KLHL35Q6PF15 583 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 RBM12BQ8IXT5 1001 aaKnown RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 RIT1Q92963 219 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 AHCYL2Q96HN2 611 aaKnown RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 CNDP2Q96KP4 475 aaKnown RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 GPN2Q9H9Y4 310 aaPredicted RBP10.59□□□□□ -0.71
SCG2-201ENST00000305409 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 WNT16Q9UBV4 365 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 ZNF232Q9UNY5 417 aa10.59□□□□□ -0.71
SCG2-201ENST00000305409 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 AGAP5A6NIR3 686 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 HYAL3O43820 417 aaPredicted RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 STX11O75558 287 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PIAS2O75928 621 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PDGFBP01127 241 aaPredicted RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 IGKV1D-16P01601 117 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 IFNA16P05015 189 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 HTR2AP28223 471 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PRKAR1BP31321 381 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 NUDT1P36639 197 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 TGFBR2P37173 567 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 GIPRP48546 466 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 FNTBP49356 437 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 C21orf59P57076 290 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CFHR1Q03591 330 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 SNAPC1Q16533 368 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 MANEAQ5SRI9 462 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 C1orf94Q6P1W5 598 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 WDR88Q6ZMY6 472 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 TTLL10Q6ZVT0 673 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SLC25A45Q8N413 288 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SPEM1Q8N4L4 309 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CDRT4Q8N9R6 151 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CADM4Q8NFZ8 388 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 WDR36Q8NI36 951 aaKnown RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 NELL2Q99435 816 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ZNF350Q9GZX5 532 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SYT5O00445 386 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ADAM11O75078 769 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 RNH1P13489 461 aaKnown RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 GNSP15586 552 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 S1PR1P21453 382 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 GADD45AP24522 165 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CXCL12P48061 93 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ZNF136P52737 540 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 EMP3P54852 163 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 EEF1A1P68104 462 aaKnown RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 PSG6Q00889 435 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PLAURQ03405 335 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ST3GAL3Q11203 375 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 TRAM2Q15035 370 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 NDUFAF6Q330K2 333 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 C14orf28Q4W4Y0 310 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PDZK1Q5T2W1 519 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 MFSD4BQ5TF39 518 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PRAMEF8Q5VWM4 474 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PRAMEF7Q5VXH5 474 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SLC30A6Q6NXT4 461 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SHFQ7M4L6 423 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ZNF619Q8N2I2 560 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 OR51Q1Q8NH59 317 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 PFN4Q8NHR9 129 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 GRHL3Q8TE85 626 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CTHRC1Q96CG8 243 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 SHDQ96IW2 340 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 GUCD1Q96NT3 240 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 LMF1Q96S06 567 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 CHRDQ9H2X0 955 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 ZBTB20Q9HC78 741 aaPredicted RBP10.58□□□□□ -0.72
SCG2-201ENST00000305409 PRTFDC1Q9NRG1 225 aa10.58□□□□□ -0.72
SCG2-201ENST00000305409 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms