RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 INSL4Q14641 139 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 PRICKLE2Q7Z3G6 844 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 OR4N5Q8IXE1 308 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 RAB42Q8N4Z0 105 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 OR4F15Q8NGB8 312 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 SPPL3Q8TCT6 385 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 RNF121Q9H920 327 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 MRPS30Q9NP92 439 aaKnown RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 DIMT1Q9UNQ2 313 aaKnown RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PP55 124 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF670-ZNF695F2Z2N8 137 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 PPM1BO75688 479 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 SOX18P35713 384 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 MC3RP41968 323 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 SLC16A1P53985 500 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 EPHA5P54756 1037 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 CLDN2P57739 230 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 LTB4RQ15722 352 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 MEDAGQ5VYS4 303 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 METRNLQ641Q3 311 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 CLCA2Q9UQC9 943 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 VCANP13611 3396 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 DSPPQ9NZW4 1301 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 A0A087WUU8 490 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 TEX51A0A1B0GUA7 166 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 FAM183AA6NL82 134 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 HRGP04196 525 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 MYOGP15173 224 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 CELP19835 753 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 TAS2R38P59533 333 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 CAMK1Q14012 370 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 SMARCD3Q6STE5 483 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 LINC00518Q8N0U6 118 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 LINC00615Q96LM1 132 aaPredicted RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 WDR26Q9H7D7 661 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 GPR55Q9Y2T6 319 aaPredicted RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 LSM2Q9Y333 95 aaKnown RBP12.61□□□□□ -0.39
CTDP1-202ENST00000299543 CHD9Q3L8U1 2897 aa12.61□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PR48 441 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 LRIT2A6NDA9 550 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 HOXD4P09016 255 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CSF3P09919 207 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 TALDO1P37837 337 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 BCL6P41182 706 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PRMT2P55345 433 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 BNC1Q01954 994 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 TEKQ02763 1124 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 AANATQ16613 207 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF791Q3KP31 576 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 FAM78AQ5JUQ0 283 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 BHLHB9Q6PI77 547 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 HDDC3Q8N4P3 179 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ACOT4Q8N9L9 421 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 TM9SF4Q92544 642 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 KCTD7Q96MP8 289 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 RHBGQ9H310 441 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PCDHGB2Q9Y5G2 931 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 DENND4CQ5VZ89 1909 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 LOC102723532A0A0G2JNH3 316 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 C2orf92A0A1B0GVN3 265 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PPV9 198 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SLC31A1O15431 190 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PLA2G10O15496 165 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 GNSP15586 552 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 KHKP50053 298 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ID2Q02363 134 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 DPTQ07507 201 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 TGM3Q08188 693 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 LRRC32Q14392 662 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ZBTB37Q5TC79 503 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SLC27A4Q6P1M0 643 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PRSS42Q7Z5A4 293 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 OR52P1PQ8NH57 321 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF431Q8TF32 576 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CNRIP1Q96F85 164 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 LINC00052Q96N35 136 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CLEC4MQ9H2X3 399 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PELI2Q9HAT8 420 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PRSS16Q9NQE7 514 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SDK1Q7Z5N4 2213 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 HYKKA2RU49 373 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 GTPBP1O00178 669 aaKnown RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SLC30A4O14863 429 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 FCMRO60667 390 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 NFATC1O95644 943 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PIPP12273 146 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 MTNR1AP48039 350 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SEC13P55735 322 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms