RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PEX12O00623 359 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 OR10H2O60403 315 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 PLOD3O60568 738 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 STX11O75558 287 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 GABRA3P34903 492 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 GPR4P46093 362 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 OCLNQ16625 522 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 RGS21Q2M5E4 152 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 SYT14P1Q58G82 188 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 MEDAGQ5VYS4 303 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 MCATQ8IVS2 390 aaKnown RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 FAM26EQ8N5C1 309 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 CDRT4Q8N9R6 151 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 OR6Q1Q8NGQ2 317 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 MCFD2Q8NI22 146 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 LMX1AQ8TE12 382 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 SLC2A4RGQ9NR83 387 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 TRIOBPQ9H2D6 2365 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 A0A087WV62 115 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 CHST10O43529 356 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 PIP5K1CO60331 668 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 ZNF217O75362 1048 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 CDC123O75794 336 aaPredicted RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 SULT1C4O75897 302 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 WNT1P04628 370 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 GKN3PP0CG01 181 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 OMPP47874 163 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 RAB38P57729 211 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 RAB15P59190 212 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 TUBA1BP68363 451 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 DUSP8Q13202 625 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 NCF4Q15080 339 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 INAQ16352 499 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 DGAT2L6Q6ZPD8 337 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 TUBA1AQ71U36 451 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 ZNF619Q8N2I2 560 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 OR8D4Q8NGM9 314 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 ACOT11Q8WXI4 607 aaPredicted RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 ANKRD9Q96BM1 317 aaPredicted RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 WDR12Q9GZL7 423 aaKnown RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 VCANP13611 3396 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 APOL3O95236 402 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 CH25HO95992 272 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 PRG2P13727 222 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 GNSP15586 552 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 UGT2B10P36537 528 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 SOX3P41225 446 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 MGAT2Q10469 447 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 ZNF155Q12901 538 aaPredicted RBP13.03□□□□□ -0.32
NXF1-201ENST00000294172 SLC13A2Q13183 592 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 DECR1Q16698 335 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 PAQR6Q6TCH4 344 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 ARL14Q8N4G2 192 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 OR52R1Q8NGF1 315 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 CHPT1Q8WUD6 406 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 S100ZQ8WXG8 99 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 ABHD8Q96I13 439 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 ZNF582Q96NG8 517 aaPredicted RBP13.03□□□□□ -0.32
NXF1-201ENST00000294172 MAP3K3Q99759 626 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 C6orf62Q9GZU0 229 aaPredicted RBP13.03□□□□□ -0.32
NXF1-201ENST00000294172 UBE2ZQ9H832 354 aaPredicted RBP13.03□□□□□ -0.32
NXF1-201ENST00000294172 IL20RAQ9UHF4 553 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 SPEGQ15772 3267 aa13.03□□□□□ -0.32
NXF1-201ENST00000294172 GXYLT2A0PJZ3 443 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 CHURC1-FNTBB4DL54 471 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 CCRL2O00421 344 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 ARHGAP33O14559 1287 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 OR5F1O95221 314 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 DBIP07108 87 aaKnown RBP13.02□□□□□ -0.32
NXF1-201ENST00000294172 BMP4P12644 408 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 NUDT1P36639 197 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 ELOCQ15369 112 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 SPHARQ15513 63 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 EIPR1Q53HC9 387 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.32
NXF1-201ENST00000294172 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 ARSGQ96EG1 525 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 DUSP22Q9NRW4 184 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 KCNE5Q9UJ90 142 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 B3GNT3Q9Y2A9 372 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 PCDHGA3Q9Y5H0 932 aa13.02□□□□□ -0.32
NXF1-201ENST00000294172 CSO75390 466 aaKnown RBP13.02□□□□□ -0.33
NXF1-201ENST00000294172 CSF2P04141 144 aa13.02□□□□□ -0.33
NXF1-201ENST00000294172 THBS1P07996 1170 aa13.02□□□□□ -0.33
NXF1-201ENST00000294172 CD38P28907 300 aa13.02□□□□□ -0.33
NXF1-201ENST00000294172 ZNF136P52737 540 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms