RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 MINDY4Q4G0A6 757 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 CT45A2Q5DJT8 189 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 VWA2Q5GFL6 755 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 PODNL1Q6PEZ8 512 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 KLHL17Q6TDP4 642 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 ZAR1Q86SH2 424 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 SLITRK4Q8IW52 837 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 GTPBP3Q969Y2 492 aaKnown RBP20.47■□□□□ 0.87
CCDC7-201ENST00000277657 SYNDIG1Q9H7V2 258 aa20.47■□□□□ 0.87
CCDC7-201ENST00000277657 NTN3O00634 580 aaPredicted RBP20.46■□□□□ 0.87
CCDC7-201ENST00000277657 POU2F1P14859 743 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 ALDH3B2P48448 385 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 NADK2Q4G0N4 442 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 PGBD2Q6P3X8 592 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 ZC3H14Q6PJT7 736 aaKnown RBP20.46■□□□□ 0.87
CCDC7-201ENST00000277657 COX15Q7KZN9 410 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 LINC00471Q8N535 108 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 MORN4Q8NDC4 146 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 OR4N2Q8NGD1 307 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 ZNF566Q969W8 418 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 SENP5Q96HI0 755 aaPredicted RBP20.46■□□□□ 0.87
CCDC7-201ENST00000277657 LOXL4Q96JB6 756 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 GFM1Q96RP9 751 aaKnown RBP20.46■□□□□ 0.87
CCDC7-201ENST00000277657 PRR14Q9BWN1 585 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 DGCR6LQ9BY27 220 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 SLC22A11Q9NSA0 550 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 PRODH2Q9UF12 536 aa20.46■□□□□ 0.87
CCDC7-201ENST00000277657 CDHR4A6H8M9 788 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 OR10H3O60404 316 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 IGKV1D-16P01601 117 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 CCNYL3P0C7X3 344 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ZNF883P0CG24 379 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 AGXTP21549 392 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 RORAP35398 523 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 GGT2P36268 569 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ZNF136P52737 540 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 NUP107P57740 925 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 TAS2R41P59536 307 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 TOP3AQ13472 1001 aaPredicted RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 MFSD4BQ5TF39 518 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 TMEM151BQ8IW70 566 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 TGIF2Q9GZN2 237 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ARRDC1-AS1Q9H2J1 176 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ADNPQ9H2P0 1102 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ANKRD19PQ9H560 264 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 Q9N2J8 555 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 PNO1Q9NRX1 252 aaKnown RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ASCC3Q8N3C0 2202 aaKnown RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 NPIPA5A0A0B4J1W7 369 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 SMIM31A0A1B0GVY4 71 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 NPIPA7E9PJI5 369 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 AP3D1O14617 1153 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 CYP7B1O75881 506 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 NPIPA8P0DM63 369 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 SLC37A1P57057 533 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ESRRGP62508 458 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 MAD2L1BPQ15013 274 aaPredicted RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 ELAVL1Q15717 326 aaKnown RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 FLYWCH1Q4VC44 716 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 MRPL2Q5T653 305 aaKnown RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 DBX2Q6ZNG2 339 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 Q6ZPB1 254 aaPredicted RBP20.45■□□□□ 0.86
CCDC7-201ENST00000277657 SLC38A9Q8NBW4 561 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 CNIH3Q8TBE1 160 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 CTPS2Q9NRF8 586 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 NDUFA13Q9P0J0 144 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 REV1Q9UBZ9 1251 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 RARRES3Q9UL19 164 aa20.45■□□□□ 0.86
CCDC7-201ENST00000277657 IGLV3-12A0A075B6K2 115 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 TIAF1O95411 115 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 CCDC159P0C7I6 412 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 GABARAPL2P60520 117 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 HOXC5Q00444 222 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 ENTPD8Q5MY95 495 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 ZSCAN1Q8NBB4 408 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 OR4K5Q8NGD3 323 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 MCHR1Q99705 422 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 ITPAQ9BY32 194 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 UCK2Q9BZX2 261 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 VN1R1Q9GZP7 353 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 SEMA4GQ9NTN9 838 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 FTSJ1Q9UET6 329 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 BLOC1S6Q9UL45 172 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 PCDHGA5Q9Y5G8 931 aa20.44■□□□□ 0.86
CCDC7-201ENST00000277657 CPSF4LA6NMK7 179 aaKnown RBP20.43■□□□□ 0.86
CCDC7-201ENST00000277657 D6RAR5 112 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 SLC1A7O00341 560 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 IGKV3-11P04433 115 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 UGT2B15P54855 530 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 CXCR4P61073 352 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 ST3GAL3Q11203 375 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 TRAM2Q15035 370 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 TCEAL6Q6IPX3 200 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 PWWP2BQ6NUJ5 590 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 TCEAL3Q969E4 200 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 SLC7A5P2Q9GIP4 190 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 CTSFQ9UBX1 484 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 CLCA3PQ9Y6N3 262 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 WDR87Q6ZQQ6 2873 aa20.43■□□□□ 0.86
CCDC7-201ENST00000277657 NPIPB9F8W1W9 429 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms