RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 F2RL3Q96RI0 385 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SLC12A9Q9BXP2 914 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 C20orf85Q9H1P6 137 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 EXO5Q9H790 373 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 FAM86C2PA6NEL3 165 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 NPIPB15A6NHN6 443 aaPredicted RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 SOD1P00441 154 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 PTH2RP49190 550 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 PSMD4P55036 377 aaKnown RBP15.32■□□□□ 0.04
GPC1-201ENST00000264039 ARF5P84085 180 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 ACSM3Q53FZ2 586 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 MLIPQ5VWP3 458 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SSX6Q7RTT6 188 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 TAF8Q7Z7C8 310 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 LINC00518Q8N0U6 118 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 OR5M3Q8NGP4 307 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 FANK1Q8TC84 345 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 ZFP64Q9NPA5 681 aa15.32■□□□□ 0.04
GPC1-201ENST00000264039 TRDV1A0A1B0GX56 115 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SCAMP1O15126 338 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 RASGRP1O95267 797 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 S100A11P31949 105 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SLC6A11P48066 632 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 CLCNKAP51800 687 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SCGB2B2Q4G0G5 96 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 TP53I3Q53FA7 332 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 LIPJQ5W064 366 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 NHLRC1Q6VVB1 395 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 RNF44Q7L0R7 432 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 OR5W2Q8NH69 310 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SORCS2Q96PQ0 1159 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SPATA5L1Q9BVQ7 753 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 ABCG4Q9H172 646 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 PRMT8Q9NR22 394 aaPredicted RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 AKAP7Q9P0M2 348 aaPredicted RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 P2RX2Q9UBL9 471 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 KPNA3O00505 521 aaPredicted RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 GPR37L1O60883 481 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 RPL4P36578 427 aaKnown RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 NCBP2P52298 156 aaKnown RBP eCLIP15.31■□□□□ 0.04
GPC1-201ENST00000264039 PAN3Q58A45 887 aaKnown RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 TMEM69Q5SWH9 247 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 PRAMEF13Q5VWM6 474 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 AFMIDQ63HM1 303 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 ZSCAN1Q8NBB4 408 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 CLRN3Q8NCR9 226 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 MYLIPQ8WY64 445 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 EID2BQ96D98 161 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 CXorf36Q9H7Y0 433 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 OR2S2Q9NQN1 319 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 GLS2Q9UI32 602 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 IRAK3Q9Y616 596 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 FAM74A7A6NL05 159 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 ZNF593O00488 134 aaPredicted RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 CNMDO75829 334 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 PSMB1P20618 241 aaKnown RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 ZP3P21754 424 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SNRPGP62308 76 aaKnown RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 FAM74A3Q4VXF1 159 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 ADGRF1Q5T601 910 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 POGLUT1Q8NBL1 392 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 OR6T1Q8NGN1 323 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SLC16A10Q8TF71 515 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 CHFRQ96EP1 664 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 GPR137Q96N19 417 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 LYARQ9NX58 379 aaKnown RBP15.31■□□□□ 0.04
GPC1-201ENST00000264039 ERVK-19Q9WJR5 959 aa15.31■□□□□ 0.04
GPC1-201ENST00000264039 PIKFYVEQ9Y2I7 2098 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ANKRD61A6NGH8 418 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 KCNJ13O60928 360 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 MT-ND5P03915 603 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 RLN2P04090 185 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ZNF35P13682 527 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 MRPL19P49406 292 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 SLC22A10Q63ZE4 541 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ATRAIDQ6UW56 229 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 MSANTD1Q6ZTZ1 278 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 SLC16A13Q7RTY0 426 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 WNT2BQ93097 391 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 SLC38A3Q99624 504 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 TREX2Q9BQ50 279 aaPredicted RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 ADAT1Q9BUB4 502 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 ACTR6Q9GZN1 396 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 RHBGQ9H310 441 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 GNG8Q9UK08 70 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 LSM7Q9UK45 103 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 PRELID3BQ9Y3B1 194 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 LY75O60449 1722 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 RNASET2O00584 256 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 ZNF821O75541 412 aaPredicted RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 CBSLP0DN79 551 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ARAFP10398 606 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 GSTM3P21266 225 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 CD9P21926 228 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms