RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 C18orf12Q96KH6 178 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 C10orf90Q96M02 699 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ALPK1Q96QP1 1244 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 MAPKAP1Q9BPZ7 522 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 UCK2Q9BZX2 261 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 CXorf36Q9H7Y0 433 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 PRDM9Q9NQV7 894 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 SIRT3Q9NTG7 399 aaPredicted RBP12.29□□□□□ -0.44
SGCA-201ENST00000262018 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
SGCA-201ENST00000262018 GPATCH2Q9NW75 528 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 KCMF1Q9P0J7 381 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 PHF11Q9UIL8 331 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 UTS2RQ9UKP6 389 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 MAU2Q9Y6X3 613 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 MYO1GB0I1T2 1018 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PRRG2O14669 202 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PGRMC2O15173 223 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 B3GALT2O43825 422 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 TNFRSF21O75509 655 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 BMP2P12643 396 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 NTSP30990 170 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PCGF2P35227 344 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 HSF1Q00613 529 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 TNFRSF17Q02223 184 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 EEF1A2Q05639 463 aaKnown RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 FAM53BQ14153 422 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.28□□□□□ -0.44
SGCA-201ENST00000262018 SAXO2Q658L1 398 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 C18orf63Q68DL7 685 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ANKFN1Q8N957 763 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ZFP28Q8NHY6 868 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ZCCHC10Q8TBK6 192 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 STT3BQ8TCJ2 826 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PNPT1Q8TCS8 783 aaKnown RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 ASB5Q8WWX0 329 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 NCLNQ969V3 563 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 NEURL3Q96EH8 262 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 UGT2B28Q9BY64 529 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 GLIPR2Q9H4G4 154 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 LYRM4Q9HD34 91 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 STMN3Q9NZ72 180 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 CDC14AQ9UNH5 594 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 SLC22A7Q9Y694 548 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 GTF3C1Q12789 2109 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 SCN3AQ9NY46 2000 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ASNA1O43681 348 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PRKRAO75569 313 aaKnown RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 INHBBP09529 407 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 RAP2AP10114 183 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 NR2F6P10588 404 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ITGAMP11215 1152 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 FASP25445 335 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 MSX1P28360 303 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 SOAT1P35610 550 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 LIM2P55344 173 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 SKP1P63208 163 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 OCA2Q04671 838 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 TFF3Q07654 80 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 RBBP4Q09028 425 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 BLMHQ13867 455 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 RUNX2Q13950 521 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 DEFB134Q4QY38 66 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 FAM98BQ52LJ0 330 aaKnown RBP12.28□□□□□ -0.44
SGCA-201ENST00000262018 SFT2D3Q587I9 215 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 COX20Q5RI15 118 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 NIPAL1Q6NVV3 410 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 FAM180BQ6P0A1 224 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 IZUMO2Q6UXV1 221 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 PDSS2Q86YH6 399 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 WFDC11Q8NEX6 87 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 AMDHD1Q96NU7 426 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 TMEM38AQ9H6F2 299 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 MAGIXQ9H6Y5 334 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 YY1AP1Q9H869 796 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 ANKHQ9HCJ1 492 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 KLHL1Q9NR64 748 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 MS4A12Q9NXJ0 267 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 RAB26Q9ULW5 256 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 DAPP1Q9UN19 280 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 HCFC1P51610 2035 aa12.28□□□□□ -0.44
SGCA-201ENST00000262018 RNF103-CHMP3A0A140T963 221 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 GALR3O60755 368 aaPredicted RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 TOXO94900 526 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 MED26O95402 600 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 SERPINA1P01009 418 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 HEXAP06865 529 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 NUDT7P0C024 238 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 ZGLP1P0C6A0 271 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 ETFAP13804 333 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 CSNK2A2P19784 350 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms