RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 Q6ZVL8 140 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TRIM48Q8IWZ4 208 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TBC1D19Q8N5T2 526 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 RASGEF1AQ8N9B8 481 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TMEM145Q8NBT3 493 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 OR5AK3PQ8NH89 298 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 DNAJA4Q8WW22 397 aaPredicted RBP19.25■□□□□ 0.67
SNX3-201ENST00000230085 LRR1Q96L50 414 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 ATF6BQ99941 703 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 SEMA3GQ9NS98 782 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TOR4AQ9NXH8 423 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TAS2R7Q9NYW3 318 aa19.25■□□□□ 0.67
SNX3-201ENST00000230085 TEX51A0A1B0GUA7 166 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 TLX2O43763 284 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 SH3BP5O60239 455 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CPNE3O75131 537 aaKnown RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 NME6O75414 186 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 IL3P08700 152 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 ARSBP15848 533 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 SOAT1P35610 550 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CASP9P55211 416 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 PCBP4P57723 403 aaKnown RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 GINS1Q14691 196 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CEP78Q5JTW2 689 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 LYSMD4Q5XG99 296 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 FAM83HQ6ZRV2 1179 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 SLC9B2Q86UD5 537 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 POGLUT1Q8NBL1 392 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 MORN4Q8NDC4 146 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 SLC5A11Q8WWX8 675 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 DNASE2BQ8WZ79 361 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 COQ10AQ96MF6 247 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 PRRG3Q9BZD7 231 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 BCL2L10Q9HD36 194 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 TMEM74BQ9NUR3 256 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 TVP23BQ9NYZ1 205 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CD84Q9UIB8 345 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 KLF15Q9UIH9 416 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CBLCQ9ULV8 474 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 FAM240BA0A1B0GVZ2 78 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 ICMTO60725 284 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CSF2P04141 144 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 HLA-DPB1P04440 258 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 BCHEP06276 602 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 IGFBP1P08833 259 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 LIMS3P0CW19 117 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 LIMS4P0CW20 117 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 APEX1P27695 318 aaKnown RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 FABP5Q01469 135 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 BDH1Q02338 343 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 CRTC2Q53ET0 693 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 RFPL4BQ6ZWI9 263 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 TECPR1Q7Z6L1 1165 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 UPRTQ96BW1 309 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 ZNF717Q9BY31 904 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 RHBGQ9H310 441 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 TRIM45Q9H8W5 580 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 MIEF1Q9NQG6 463 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 MAN2C1Q9NTJ4 1040 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 ACSS1Q9NUB1 689 aaPredicted RBP19.24■□□□□ 0.67
SNX3-201ENST00000230085 CA5BQ9Y2D0 317 aa19.24■□□□□ 0.67
SNX3-201ENST00000230085 WDR87Q6ZQQ6 2873 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 GPR179Q6PRD1 2367 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 LINC00862A6NCI5 91 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 HMGN4O00479 90 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 MMP11P24347 488 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 CD27P26842 260 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 WSCD2Q2TBF2 565 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 HSD17B12Q53GQ0 312 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 PODNL1Q6PEZ8 512 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 TMEM107Q6UX40 140 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 IDO2Q6ZQW0 420 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 ZER1Q7Z7L7 766 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 NRSN1Q8IZ57 195 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 OR4M1Q8NGD0 313 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 OR4D11Q8NGI4 311 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 AKAP1Q92667 903 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNX3-201ENST00000230085 GLYATL1Q969I3 302 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 C1GALT1C1Q96EU7 318 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 MBNL1Q9NR56 388 aaKnown RBP19.23■□□□□ 0.67
SNX3-201ENST00000230085 SIRT3Q9NTG7 399 aaPredicted RBP19.23■□□□□ 0.67
SNX3-201ENST00000230085 FBXW2Q9UKT8 454 aa19.23■□□□□ 0.67
SNX3-201ENST00000230085 TNRC6BQ9UPQ9 1833 aaKnown RBP19.23■□□□□ 0.67
SNX3-201ENST00000230085 CHST10O43529 356 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 MTX2O75431 263 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 KLK1P06870 262 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 FHP07954 510 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 HNRNPA2B1P22626 353 aaKnown RBP19.22■□□□□ 0.67
SNX3-201ENST00000230085 WDR45BQ5MNZ6 344 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 PRAMEF8Q5VWM4 474 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 PRAMEF7Q5VXH5 474 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 ELMOD2Q8IZ81 293 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 SUMF1Q8NBK3 374 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 OR9A1PQ8NGU1 263 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 OR52N1Q8NH53 320 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 C1orf216Q8TAB5 229 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 SCAMP4Q969E2 229 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 KCTD12Q96CX2 325 aaKnown RBP19.22■□□□□ 0.67
SNX3-201ENST00000230085 DTD2Q96FN9 168 aa19.22■□□□□ 0.67
SNX3-201ENST00000230085 PRRC1Q96M27 445 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms