RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 HSD17B8Q92506 261 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 TMEM168Q9H0V1 697 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PCDHB16Q9NRJ7 776 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 KIF25Q9UIL4 384 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 CBLCQ9ULV8 474 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 KRBOX1C9JBD0 128 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 HMGN4O00479 90 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ATG13O75143 517 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ACVR1BP36896 505 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 MAPK9P45984 424 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 GPR4P46093 362 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ZNF155Q12901 538 aaPredicted RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 BTN2A1Q7KYR7 527 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PRSS45Q7RTY3 260 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 NR2C2APQ86WQ0 139 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 KRT78Q8N1N4 520 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ACBD7Q8N6N7 88 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PAWRQ96IZ0 340 aaKnown RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 TRIM36Q9NQ86 728 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ZNF69Q9UC07 566 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 SH2B3Q9UQQ2 575 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 CHST2Q9Y4C5 530 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 IGLV3-16A0A075B6K0 115 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 A0A087WUU8 490 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ADAM12O43184 909 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 VNN2O95498 520 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PTGER1P34995 402 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 TRIM23P36406 574 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 CTSCP53634 463 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ZNF273Q14593 569 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 KCNA10Q16322 511 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 CLVS2Q5SYC1 327 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ZDHHC20Q5W0Z9 365 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PRICKLE2Q7Z3G6 844 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 TRMT11Q7Z4G4 463 aaKnown RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 TBC1D19Q8N5T2 526 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 OR52N1Q8NH53 320 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 KCTD12Q96CX2 325 aaKnown RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 KLHL15Q96M94 604 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 ALG8Q9BVK2 526 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 RIOK2Q9BVS4 552 aaKnown RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
SHPK-201ENST00000225519 BABAM2Q9NXR7 383 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 RPS6KB2Q9UBS0 482 aa13.35□□□□□ -0.27
SHPK-201ENST00000225519 PDCD5O14737 125 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 ZNF821O75541 412 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 SLCO2B1O94956 709 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 GJA1P17302 382 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 TMEM220Q6QAJ8 160 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 SLC5A11Q8WWX8 675 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 MARC2Q969Z3 335 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 UBL7Q96S82 380 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 Q9Y3F1 56 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 A0A0G2JN53 185 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 PEX14O75381 377 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 STX11O75558 287 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 EOMESO95936 686 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 SNRPBP14678 240 aaKnown RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 DEFA5Q01523 94 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 CST9Q5W186 159 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 SLC22A10Q63ZE4 541 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 HMGB4Q8WW32 186 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 ZNF416Q9BWM5 594 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 A0A0B4J203 849 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 KDM4EB2RXH2 506 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 FOXE1O00358 373 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 SLC2A10O95528 541 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 VEGFCP49767 419 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 TLE2Q04725 743 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 SLC25A35Q3KQZ1 300 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 C17orf107Q6ZR85 190 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 CFAP206Q8IYR0 622 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 LSM14AQ8ND56 463 aaKnown RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 KAT2AQ92830 837 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 KLF16Q9BXK1 252 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 C20orf85Q9H1P6 137 aa13.34□□□□□ -0.27
SHPK-201ENST00000225519 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
SHPK-201ENST00000225519 NTN1O95631 604 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.27
SHPK-201ENST00000225519 GATMP50440 423 aa13.33□□□□□ -0.27
SHPK-201ENST00000225519 ERVFC1P60507 584 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms