RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 STX5Q13190 355 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 TOMM20Q15388 145 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 GSTA3Q16772 222 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.57□□□□□ -0.56
LSM5-201ENST00000223084 GRAMD1BQ3KR37 738 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 EIPR1Q53HC9 387 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ANXA8L1Q5VT79 327 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 CDC73Q6P1J9 531 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ZCCHC12Q6PEW1 402 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 DOLPP1Q86YN1 238 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 COX18Q8N8Q8 333 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 OR5M9Q8NGP3 310 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 OR9I1Q8NGQ6 314 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ZBTB18Q99592 522 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 INPP5KQ9BT40 448 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ACTRT3Q9BYD9 372 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 SERHL2Q9H4I8 314 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 QPCTLQ9NXS2 382 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 FBXL2Q9UKC9 423 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 MRTO4Q9UKD2 239 aaKnown RBP11.57□□□□□ -0.56
LSM5-201ENST00000223084 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 FAF1Q9UNN5 650 aaPredicted RBP11.57□□□□□ -0.56
LSM5-201ENST00000223084 WIF1Q9Y5W5 379 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 USP9YO00507 2555 aaPredicted RBP11.57□□□□□ -0.56
LSM5-201ENST00000223084 TEP1Q99973 2627 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 WIPF3A6NGB9 483 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 AQP7O14520 342 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 SUSD5O60279 629 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 HCN1O60741 890 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 PGRP06401 933 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 UQCRC2P22695 453 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 TCEA1P23193 301 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 ELAVL4P26378 380 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 CDKN2CP42773 168 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 ZFP36L2P47974 494 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 PSMD4P55036 377 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 POU6F2P78424 691 aaPredicted RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 DPY19L1Q2PZI1 675 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 HSP90B2PQ58FF3 399 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 EMC4Q5J8M3 183 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 WIPI1Q5MNZ9 446 aaPredicted RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 APOOLQ6UXV4 268 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 C6orf120Q7Z4R8 191 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 YRDCQ86U90 279 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 MARCH3Q86UD3 253 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 OR4C3Q8NH37 302 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 RFWD2Q8NHY2 731 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 NEIL3Q8TAT5 605 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 FAM110BQ8TC76 370 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 ADAMTS15Q8TE58 950 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 MOAP1Q96BY2 351 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 CCDC120Q96HB5 630 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 SLC35G5Q96KT7 338 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 CCDC115Q96NT0 180 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 OR7D2Q96RA2 312 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 STACQ99469 402 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 BTBD2Q9BX70 525 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 PIGUQ9H490 435 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 SDR39U1Q9NRG7 319 aaPredicted RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 DUSP22Q9NRW4 184 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 PNPLA3Q9NST1 481 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 FAM120CQ9NX05 1096 aaKnown RBP11.56□□□□□ -0.56
LSM5-201ENST00000223084 GIN1Q9NXP7 522 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 SLC6A5Q9Y345 797 aa11.56□□□□□ -0.56
LSM5-201ENST00000223084 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 NPIPA5A0A0B4J1W7 369 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 A1L4Q6 167 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 NPIPA7E9PJI5 369 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 HPNP05981 417 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 GSNP06396 782 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 NPIPA8P0DM63 369 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
LSM5-201ENST00000223084 MATN1P21941 496 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 PER3P56645 1201 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 SF3A3Q12874 501 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■■■□ 19.8
LSM5-201ENST00000223084 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.55□□□□□ -0.56
LSM5-201ENST00000223084 GXYLT1Q4G148 440 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 PLCZ1Q86YW0 608 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 MIER2Q8N344 545 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 RPRMLQ8N4K4 120 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 GATSQ8NAP1 163 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 GLB1L3Q8NCI6 653 aaPredicted RBP11.55□□□□□ -0.56
LSM5-201ENST00000223084 FAM83FQ8NEG4 500 aaPredicted RBP11.55□□□□□ -0.56
LSM5-201ENST00000223084 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 SLC35A5Q9BS91 424 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 CCDC28BQ9BUN5 200 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 OR51I1Q9H343 314 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 DSN1Q9H410 356 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 NPHS2Q9NP85 383 aa11.55□□□□□ -0.56
LSM5-201ENST00000223084 ZIM2Q9NZV7 527 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms