RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 UPRTQ96BW1 309 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 SECISBP2Q96T21 854 aaKnown RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 TMEM43Q9BTV4 400 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 RNF32Q9H0A6 362 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 BTBD1Q9H0C5 482 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 ACOXLQ9NUZ1 547 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 IMP3Q9NV31 184 aaKnown RBP16.16■□□□□ 0.18
USB1-201ENST00000219281 CSNK1G3Q9Y6M4 447 aa16.16■□□□□ 0.18
USB1-201ENST00000219281 EMC8O43402 210 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 CHST10O43529 356 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 CSNK2A2P19784 350 aaPredicted RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 ATP5A1P25705 553 aaKnown RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 INPP1P49441 399 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 PRR5P85299 388 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 FAPQ12884 760 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 FAM214AQ32MH5 1076 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 PRAMEF8Q5VWM4 474 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 PRAMEF7Q5VXH5 474 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 MZT2AQ6P582 158 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 ABHD17CQ6PCB6 329 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 PLEKHM3Q6ZWE6 761 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 NRMQ8IXM6 262 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 TTLQ8NG68 377 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 JPH3Q8WXH2 748 aaPredicted RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 OTULINQ96BN8 352 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 COQ7Q99807 217 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 KLHL21Q9UJP4 597 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 EXOGQ9Y2C4 368 aaKnown RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 LOC102723532A0A0G2JNH3 316 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 SOCS6O14544 535 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 NFATC1O95644 943 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 THY1P04216 161 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 CERS1P27544 350 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 ERVK-21P61565 698 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 PGGHGQ32M88 737 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 VASNQ6EMK4 673 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 MRM1Q6IN84 353 aaKnown RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 B3GLCTQ6Y288 498 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 GJD3Q8N144 294 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 GRPEL2Q8TAA5 225 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 DNAJA4Q8WW22 397 aaPredicted RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 NR4A3Q92570 626 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 KAT2AQ92830 837 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 MOAP1Q96BY2 351 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 TEX12Q9BXU0 123 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 MRPS30Q9NP92 439 aaKnown RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 MBNL1Q9NR56 388 aaKnown RBP16.15■□□□□ 0.18
USB1-201ENST00000219281 IL20Q9NYY1 176 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 CES1P1Q9UKY3 287 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 CBLCQ9ULV8 474 aa16.15■□□□□ 0.18
USB1-201ENST00000219281 ISM1B1AKI9 464 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 FCMRO60667 390 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ZIC2O95409 532 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 FPR3P25089 353 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ERP29P30040 261 aaKnown RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 IFNA8P32881 189 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 IL12RB1P42701 662 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 CLDN20P56880 219 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 RGS8P57771 180 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 RAB8AP61006 207 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 EOGTQ5NDL2 527 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 SLC48A1Q6P1K1 146 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 TMEM91Q6ZNR0 172 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 C16orf62Q7Z3J2 963 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 PEX5LQ8IYB4 626 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ZFAND1Q8TCF1 268 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 TMEM255BQ8WV15 326 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ACOT11Q8WXI4 607 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 CHFRQ96EP1 664 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 NECTIN4Q96NY8 510 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 ISG20L2Q9H9L3 353 aaKnown RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 H2AFY2Q9P0M6 372 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 YBX2Q9Y2T7 364 aaKnown RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 FAM183AA6NL82 134 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 IGHA1P01876 353 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 F3P13726 295 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 FCARP24071 287 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 HTR1FP30939 366 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 MPIP34949 423 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 RAB28P51157 221 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ABATP80404 500 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ACSM1Q08AH1 577 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 SF3A2Q15428 464 aaKnown RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 LTB4RQ15722 352 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 DECR1Q16698 335 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 C6orf132Q5T0Z8 1188 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ZNF57Q68EA5 555 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 TANGO2Q6ICL3 276 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ZNF322Q6U7Q0 402 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 GDF7Q7Z4P5 450 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 SIRT6Q8N6T7 355 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 OR52N1Q8NH53 320 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 ELP4Q96EB1 424 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 SLC41A3Q96GZ6 507 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 MCHR1Q99705 422 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 TRIM45Q9H8W5 580 aaPredicted RBP16.14■□□□□ 0.17
USB1-201ENST00000219281 SLC6A20Q9NP91 592 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 TNFRSF10DQ9UBN6 386 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms