RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PSKH1P11801 424 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 MYL9P24844 172 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 RHAGQ02094 409 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 AGERQ15109 404 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 CDK10Q15131 360 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 SLX4IPQ5VYV7 408 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 FBXO42Q6P3S6 717 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 ZNF438Q7Z4V0 828 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 CADM2Q8N3J6 435 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 NLGN4YQ8NFZ3 816 aaPredicted RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 OR7G2Q8NG99 324 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 OR52I1Q8NGK6 324 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 RASSF5Q8WWW0 418 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 ELSPBP1Q96BH3 223 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 CITED4Q96RK1 184 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 RAB11FIP5Q9BXF6 653 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 PITHD1Q9GZP4 211 aaPredicted RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 SNX7Q9UNH6 387 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 MRPS2Q9Y399 296 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 PCDHGB2Q9Y5G2 931 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 DENND4AQ7Z401 1863 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 OR6C74A6NCV1 312 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 LDB3O75112 727 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 MSL3P1P0C860 447 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 GIPRP48546 466 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TRA2BP62995 288 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 PRR5P85299 388 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TRIM69Q86WT6 500 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 MFSD9Q8NBP5 474 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ENKURQ8TC29 256 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 CDS1Q92903 461 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 BMFQ96LC9 184 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SLC38A1Q9H2H9 487 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TBC1D17Q9HA65 648 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SEMA4GQ9NTN9 838 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 GIMAP4Q9NUV9 329 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 DZANK1Q9NVP4 752 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NPIPA5A0A0B4J1W7 369 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 CENPVL1A0A0U1RR11 272 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 HYKKA2RU49 373 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NPIPA7E9PJI5 369 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NPIPA8P0DM63 369 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NR2F6P10588 404 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 CPN2P22792 545 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SOX18P35713 384 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 AHRP35869 848 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 KIR2DL3P43628 341 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 MAN2A2P49641 1150 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 ZNF730Q6ZMV8 503 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 RRM2BQ7LG56 351 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 KIF18BQ86Y91 864 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ADAMTS15Q8TE58 950 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SLC35A4Q96G79 324 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TMED9Q9BVK6 235 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 HDHD5Q9BXW7 423 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 RPRD1BQ9NQG5 326 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 NDRG2Q9UN36 371 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 CHST2Q9Y4C5 530 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 A0A0B4J293 547 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 A0A1W2PRQ8 180 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 EMC8O43402 210 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 CTHP32929 405 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 GPR4P46093 362 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 STXBP1P61764 594 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 ABATP80404 500 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 MLC1Q15049 377 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 NCF4Q15080 339 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 GPR68Q15743 365 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TRMT12Q53H54 448 aaKnown RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 FAM209AQ5JX71 171 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 BHLHB9Q6PI77 547 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 LYPD8Q6UX82 237 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 MORN4Q8NDC4 146 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 OR5T3Q8NGG3 340 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 OR8J1Q8NGP2 316 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 OR52P1PQ8NH57 321 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 BBS10Q8TAM1 723 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 RNF31Q96EP0 1072 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 MRGPRX1Q96LB2 322 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ZNF681Q96N22 645 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 ADAP2Q9NPF8 381 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 PLEKHB1Q9UF11 243 aaPredicted RBP12.28□□□□□ -0.44
CTNS-201ENST00000046640 ACAD8Q9UKU7 415 aa12.28□□□□□ -0.44
CTNS-201ENST00000046640 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
CTNS-201ENST00000046640 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 A6NIN4 97 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 FAM170BA6NMN3 283 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 ALPPP05187 535 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.45
CTNS-201ENST00000046640 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms