RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GABRPO00591 440 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CCNYL3P0C7X3 344 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 FOSL1P15407 271 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 PRKCAP17252 672 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CPN2P22792 545 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 GPR4P46093 362 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 PPP3R1P63098 170 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 IL18Q14116 193 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 EFR3AQ14156 821 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 ADAMTSL4Q6UY14 1074 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 ZFPM2Q8WW38 1151 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SPRYD4Q8WW59 207 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 MS4A6EQ96DS6 147 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 C12orf66Q96MD2 445 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SLC38A2Q96QD8 506 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 RNF32Q9H0A6 362 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 RBFOX1Q9NWB1 397 aaKnown RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CSNK1G3Q9Y6M4 447 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 FAM183AA6NL82 134 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SURF4O15260 269 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 FGF19O95750 216 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 AIFM1O95831 613 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SLC35G4P0C7Q5 338 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 HSD17B2P37059 387 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 MC3RP41968 323 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CTAG1AP78358 180 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 EOGTQ5NDL2 527 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 NR2C2APQ86WQ0 139 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 C19orf18Q8NEA5 215 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 NEIL3Q8TAT5 605 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 OSGEPL1Q9H4B0 414 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 CES1P1Q9UKY3 287 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-233ENST00000642021 PLEKHM1Q9Y4G2 1056 aa12.95□□□□□ -0.34
PHGDH-233ENST00000642021 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 RPN2P04844 631 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 CCL5P13501 91 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 CERS1P27544 350 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 RAB8AP61006 207 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 SNRPNP63162 240 aaKnown RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TRAM2Q15035 370 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 LTB4RQ15722 352 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ZIC1Q15915 447 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TRIQKQ629K1 86 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ABHD17CQ6PCB6 329 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TMEM64Q6YI46 380 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 OR9A2Q8NGT5 310 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 KAT2AQ92830 837 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TRIM43Q96BQ3 446 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 SECISBP2Q96T21 854 aaKnown RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ARHGDIGQ99819 225 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 FAIM2Q9BWQ8 316 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ISG20L2Q9H9L3 353 aaKnown RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 LTBP2Q14767 1821 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 DOCK9Q9BZ29 2069 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 SOCS6O14544 535 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 CDC42EP2O14613 210 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 HRO43593 1189 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 FKTNO75072 461 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 CLTBP09497 229 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TGM3Q08188 693 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 C6orf132Q5T0Z8 1188 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 MRM1Q6IN84 353 aaKnown RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 SYCE2Q6PIF2 218 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 KLBQ86Z14 1044 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 DUSP18Q8NEJ0 188 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 TMEM255BQ8WV15 326 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF304Q9HCX3 659 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 ACOXLQ9NUZ1 547 aa12.94□□□□□ -0.34
PHGDH-233ENST00000642021 SIRT4Q9Y6E7 314 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-233ENST00000642021 OR52A4PA6NMU1 304 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 SMLR1H3BR10 107 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 LYRM1O43325 122 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 HCN1O60741 890 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 B3GALNT1O75752 331 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 ATP5A1P25705 553 aaKnown RBP12.93□□□□□ -0.34
PHGDH-233ENST00000642021 DGLUCYQ7Z3D6 616 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 FBXL6Q8N531 539 aa12.93□□□□□ -0.34
PHGDH-233ENST00000642021 NUP43Q8NFH3 380 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms