RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 BHLHA9Q7RTU4 235 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 UBTD2Q8WUN7 234 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 THAP4Q8WY91 577 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
SCARB2-216ENST00000639300 SGK494L7N484 410 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PPM1BO75688 479 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 C1QAP02745 245 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PRKCAP17252 672 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 GPR143P51810 404 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 ZNF91Q05481 1191 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 SEC23BQ15437 767 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 FARSAQ9Y285 508 aaKnown RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 CDC40O60508 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PLGP00747 810 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 RNF111Q6ZNA4 994 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 OR13F1Q8NGS4 319 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 CD40LGP29965 261 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 AKR1D1P51857 326 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 RPL13AP3Q6NVV1 102 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 NCCRP1Q6ZVX7 275 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 SLC25A37Q9NYZ2 338 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 C17orf113A0A1B0GUU1 675 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 FOXE1O00358 373 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 ACTC1P68032 377 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 ACTA1P68133 377 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 NSDHLQ15738 373 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 OR2L3Q8NG85 312 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-216ENST00000639300 PRR14Q9BWN1 585 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 IRF2BPLQ9H1B7 796 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 OR6C2Q9NZP2 312 aa13.59□□□□□ -0.23
SCARB2-216ENST00000639300 KCNJ13O60928 360 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 MAOBP27338 520 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 ALDH3B2P48448 385 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 SGCBQ16585 318 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 LRRC26Q2I0M4 334 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 DESI1Q6ICB0 168 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 ZNF852Q6ZMS4 543 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 VWA5B2Q8N398 1253 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 DNAJC22Q8N4W6 341 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 NIPSNAP1Q9BPW8 284 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.23
SCARB2-216ENST00000639300 RREB1Q92766 1687 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 C9J4A7 227 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 AK1P00568 194 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 RASGEF1BQ0VAM2 473 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 TBCEQ15813 527 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-216ENST00000639300 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM239Q8WW34 195 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 PRRC1Q96M27 445 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 PINK1Q9BXM7 581 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 PRSS16Q9NQE7 514 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 AGAP5A6NIR3 686 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 KLK3P07288 261 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF81P51508 661 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 CTXN1P60606 82 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 BTBD16Q32M84 506 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 PRAMEF17Q5VTA0 474 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 FOXB2Q5VYV0 432 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF227Q86WZ6 799 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 OR4F15Q8NGB8 312 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 ACOT11Q8WXI4 607 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-216ENST00000639300 OR7D2Q96RA2 312 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 MROQ9BYG7 248 aa13.58□□□□□ -0.24
SCARB2-216ENST00000639300 PTHP01270 115 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 DRD5P21918 477 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MAPK3P27361 379 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ATXN7L3Q14CW9 347 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 GAL3ST3Q96A11 431 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 AMBRA1Q9C0C7 1298 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 EGLN3Q9H6Z9 239 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 THSD1Q9NS62 852 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 I3L521 148 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 UPK1BO75841 260 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 AIFM1O95831 613 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 TSPAN12O95859 305 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MYOGP15173 224 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ADARB1P78563 741 aaKnown RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 GAB1Q13480 694 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 NTRK2Q16620 822 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 TP53I3Q53FA7 332 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 C18orf63Q68DL7 685 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 C1orf94Q6P1W5 598 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 OR6Q1Q8NGQ2 317 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms