RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ARHGEF9O43307 516 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 C1QBP02746 253 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 CCNYL3P0C7X3 344 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ALPPL2P10696 532 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 HTR2BP41595 481 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC30A6Q6NXT4 461 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMEM107Q6UX40 140 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 PAMR1Q6UXH9 720 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 MRPL43Q8N983 215 aaKnown RBP18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR4Q3Q8NH05 313 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACOT11Q8WXI4 607 aaPredicted RBP18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ING5Q8WYH8 240 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR7D2Q96RA2 312 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 JAM3Q9BX67 310 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 KLHL31Q9H511 634 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 A0A1W2PR48 441 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 EMC8O43402 210 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC19A2O60779 497 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 CPNE3O75131 537 aaKnown RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 PCCBP05166 539 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 HIST1H1TP22492 207 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 HTR1FP30939 366 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 ARFIP1P53367 373 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 TGM3Q08188 693 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 DECR1Q16698 335 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 MRM1Q6IN84 353 aaKnown RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 VRK2Q86Y07 508 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 MARVELD1Q9BSK0 173 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 C11orf49Q9H6J7 331 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 PHF11Q9UIL8 331 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACSL5Q9ULC5 683 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 GPR55Q9Y2T6 319 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 ATG4BQ9Y4P1 393 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 FRS3O43559 492 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC43A1O75387 559 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 CH25HO95992 272 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 CEBPBP17676 345 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 CSNK2A2P19784 350 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 WSCD2Q2TBF2 565 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 PGGHGQ32M88 737 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR2A1Q8NGT9 310 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR8K5Q8NH50 307 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 RAB7BQ96AH8 199 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 OTULINQ96BN8 352 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 MS4A6EQ96DS6 147 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 SENP5Q96HI0 755 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 FERD3LQ96RJ6 166 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 LGR4Q9BXB1 951 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 KLHL28Q9NXS3 571 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 NLKQ9UBE8 527 aa18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMA7Q9Y2S6 64 aaKnown RBP18.84■□□□□ 0.61
SYNGAP1-227ENST00000638142 SHISA3A0PJX4 238 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ERI3O43414 337 aaKnown RBP18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ORC5O43913 435 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 NCR1O76036 304 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 CSF2RAP15509 400 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRKAR1BP31321 381 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 BCL6P41182 706 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 P2RY2P41231 377 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 AVPR1BP47901 424 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 INPP1P49441 399 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 DUSP2Q05923 314 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF750Q32MQ0 723 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 PIP5KL1Q5T9C9 394 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACOT4Q8N9L9 421 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 SPRYD4Q8WW59 207 aaPredicted RBP18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACOT12Q8WYK0 555 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 RNF32Q9H0A6 362 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 ING3Q9NXR8 418 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 CLCA3PQ9Y6N3 262 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 DENND4AQ7Z401 1863 aa18.83■□□□□ 0.61
SYNGAP1-227ENST00000638142 AIFM1O95831 613 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 TRHRP34981 398 aaPredicted RBP18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 RAB28P51157 221 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF791Q3KP31 576 aaPredicted RBP18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 EOGTQ5NDL2 527 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 ABHD17CQ6PCB6 329 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 GRASPQ7Z6J2 395 aaPredicted RBP18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 GLCCI1Q86VQ1 547 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 KLK6Q92876 244 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 UPRTQ96BW1 309 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 SECISBP2Q96T21 854 aaKnown RBP18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 HDAC8Q9BY41 377 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 TRIM45Q9H8W5 580 aaPredicted RBP18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 PRDM7Q9NQW5 492 aa18.83■□□□□ 0.6
SYNGAP1-227ENST00000638142 MYO10Q9HD67 2058 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 MUC22E2RYF6 1773 aaPredicted RBP18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 C4orf51C9J302 202 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 KLF4O43474 513 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ATP5A1P25705 553 aaKnown RBP18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 BDH1Q02338 343 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ADAM15Q13444 863 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF234Q14588 700 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 C1orf53Q5VUE5 145 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 VASNQ6EMK4 673 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 SLC48A1Q6P1K1 146 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF322Q6U7Q0 402 aaPredicted RBP18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 LYPD8Q6UX82 237 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 ZNF620Q6ZNG0 422 aa18.82■□□□□ 0.6
SYNGAP1-227ENST00000638142 TRILQ7L0X0 811 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms