RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TSPAN31Q12999 210 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 GPR68Q15743 365 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 SNAPC1Q16533 368 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 ZNF404Q494X3 552 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 SYT14P1Q58G82 188 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 ZNF836Q6ZNA1 936 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 NKAIN4Q8IVV8 208 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 CA13Q8N1Q1 262 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 TEX47Q8TBZ9 253 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 ANKRD19PQ9H560 264 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 GPR27Q9NS67 375 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 RHBDL2Q9NX52 303 aa20.08■□□□□ 0.8
CLN6-224ENST00000638076 CENPVL1A0A0U1RR11 272 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 ARHGAP33O14559 1287 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 GPR75O95800 540 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 RHAGQ02094 409 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 LARS2Q15031 903 aaKnown RBP20.07■□□□□ 0.8
CLN6-224ENST00000638076 SLC25A30Q5SVS4 291 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 KBTBD8Q8NFY9 601 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 RNF217Q8TC41 542 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 ZDHHC1Q8WTX9 485 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 CHPT1Q8WUD6 406 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 COX4I2Q96KJ9 171 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 PIGUQ9H490 435 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 SGK494L7N484 410 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 CSO75390 466 aaKnown RBP20.07■□□□□ 0.8
CLN6-224ENST00000638076 THY1P04216 161 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 OMPP47874 163 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 EFNB1P98172 346 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 MAP4K2Q12851 820 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 DEFB110Q30KQ9 67 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 C19orf48Q6RUI8 117 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 C11orf74Q86VG3 221 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 ATCAYQ86WG3 371 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 RLN3Q8WXF3 142 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 OPALINQ96PE5 141 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 SAP130Q9H0E3 1048 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 ANKHQ9HCJ1 492 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 FAM60AQ9NP50 221 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 CLCA2Q9UQC9 943 aa20.07■□□□□ 0.8
CLN6-224ENST00000638076 LSM2Q9Y333 95 aaKnown RBP20.07■□□□□ 0.8
CLN6-224ENST00000638076 TRIOO75962 3097 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 A0A1W2PPC4 97 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 B4DGG1 531 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 OCM2P0CE71 109 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 OCMP0CE72 109 aaPredicted RBP20.06■□□□□ 0.8
CLN6-224ENST00000638076 ST6GAL1P15907 406 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 IGFBP4P22692 258 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 RAB15P59190 212 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 SSX1Q16384 188 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 ARMC6Q6NXE6 501 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 SLC27A4Q6P1M0 643 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 GDF7Q7Z4P5 450 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 FAM160A2Q8N612 972 aaPredicted RBP20.06■□□□□ 0.8
CLN6-224ENST00000638076 OR8D4Q8NGM9 314 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 PIGXQ8TBF5 258 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 ACOT11Q8WXI4 607 aaPredicted RBP20.06■□□□□ 0.8
CLN6-224ENST00000638076 PIK3R3Q92569 461 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 FGF11Q92914 225 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 SLC41A3Q96GZ6 507 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 ZNF582Q96NG8 517 aaPredicted RBP20.06■□□□□ 0.8
CLN6-224ENST00000638076 TAPBPLQ9BX59 468 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 MMP27Q9H306 513 aa20.06■□□□□ 0.8
CLN6-224ENST00000638076 A0A087WV62 115 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 METTL15A6NJ78 407 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 DSCR3O14972 297 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 PLOD3O60568 738 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 ALOX5P09917 674 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 RPS3AP61247 264 aaKnown RBP20.05■□□□□ 0.8
CLN6-224ENST00000638076 DUSP8Q13202 625 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 DCST2Q5T1A1 773 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 RASSF6Q6ZTQ3 369 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 SNX29P2Q8IUI4 249 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 AMER2Q8N7J2 671 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 KLHDC7BQ96G42 594 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 MND1Q9BWT6 205 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 ZNF350Q9GZX5 532 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 TBCCD1Q9NVR7 557 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 AGAP5A6NIR3 686 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 SCG5P05408 212 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 CTSBP07858 339 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 PSMD7P51665 324 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 SPHARQ15513 63 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 DECR1Q16698 335 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 PRICKLE4Q2TBC4 344 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 TIMM50Q3ZCQ8 353 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 PARGQ86W56 976 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 MSANTD3Q96H12 275 aa20.05■□□□□ 0.8
CLN6-224ENST00000638076 OR5F1O95221 314 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 CT62P0C5K7 136 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 BLKP51451 505 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 EEF1A1P68104 462 aaKnown RBP20.04■□□□□ 0.8
CLN6-224ENST00000638076 EXOSC7Q15024 291 aaKnown RBP20.04■□□□□ 0.8
CLN6-224ENST00000638076 MAPK14Q16539 360 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 CLEC12AQ5QGZ9 265 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 PAQR6Q6TCH4 344 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 CDRT4Q8N9R6 151 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 TMEM255BQ8WV15 326 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 ORAI3Q9BRQ5 295 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 SEMA6CQ9H3T2 930 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms