RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ABCB7O75027 752 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 CBR3O75828 277 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 EPPINO95925 133 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 GABRA3P34903 492 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 EVI2BP34910 448 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 ZNF136P52737 540 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 PNLIPRP2P54317 469 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 PRKAG1P54619 331 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 POMZP3Q6PJE2 187 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 SZRD1Q7Z422 152 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 EXOC3L1Q86VI1 746 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 TRIM42Q8IWZ5 723 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 DMRTC2Q8IXT2 367 aaPredicted RBP16.1■□□□□ 0.17
PNKP-230ENST00000638016 OR7A2PQ8NGA2 310 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 TUBA1CQ9BQE3 449 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 LMF2Q9BU23 707 aaKnown RBP16.1■□□□□ 0.17
PNKP-230ENST00000638016 TAS2R10Q9NYW0 307 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 SPG11Q96JI7 2443 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 MED12LQ86YW9 2145 aa16.1■□□□□ 0.17
PNKP-230ENST00000638016 TACC2O95359 2948 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 GMFGO60234 142 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 FADS1O60427 444 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 HOXD4P09016 255 aaPredicted RBP16.09■□□□□ 0.17
PNKP-230ENST00000638016 ACP2P11117 423 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 BMP5P22003 454 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 SSTR2P30874 369 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 CEACAM8P31997 349 aaPredicted RBP16.09■□□□□ 0.17
PNKP-230ENST00000638016 GPC1P35052 558 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 FRKP42685 505 aaPredicted RBP16.09■□□□□ 0.17
PNKP-230ENST00000638016 GFRA1P56159 465 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 PTGR1Q14914 329 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 NSUN5P2Q63ZY6 315 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 C9orf106Q8NAJ2 232 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 GIMAP5Q96F15 307 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 C14orf79Q96F83 325 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 RMND5BQ96G75 393 aaPredicted RBP16.09■□□□□ 0.17
PNKP-230ENST00000638016 PPP1R36Q96LQ0 422 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 YIPF4Q9BSR8 244 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 G6PC3Q9BUM1 346 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 DSN1Q9H410 356 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 EML4Q9HC35 981 aaKnown RBP16.09■□□□□ 0.17
PNKP-230ENST00000638016 Q9N2J8 555 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 MED11Q9P086 117 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 AKAP6Q13023 2319 aa16.09■□□□□ 0.17
PNKP-230ENST00000638016 ZIC3O60481 467 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 TBX19O60806 448 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 SLITRK5O94991 958 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 SRD5A2P31213 254 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 SERPINB4P48594 390 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 MPP2Q14168 576 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 CYP27C1Q4G0S4 372 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 APOOLQ6UXV4 268 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 ZAR1Q86SH2 424 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 MARCH3Q86UD3 253 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 IFNEQ86WN2 208 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 LACC1Q8IV20 430 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 KRTCAP2Q8N6L1 136 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 NUP43Q8NFH3 380 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 OR2M3Q8NG83 312 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 OR5M1Q8NGP8 315 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 C16orf58Q96GQ5 468 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.16
PNKP-230ENST00000638016 C20orf27Q9GZN8 174 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
PNKP-230ENST00000638016 PPP4R1LQ9P1A2 415 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 DKKL1Q9UK85 242 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 RAB21Q9UL25 225 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 TMED5Q9Y3A6 229 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 AKAP9Q99996 3911 aa16.08■□□□□ 0.16
PNKP-230ENST00000638016 MPDZO75970 2070 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 ANKHD1Q8IWZ3 2542 aaKnown RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 OTOGQ6ZRI0 2925 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 ESPNB1AK53 854 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 H0Y3Z8 333 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 SCAMP2O15127 329 aaKnown RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 RGS16O15492 202 aaPredicted RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 IL33O95760 270 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 ACTL6AO96019 429 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 LAMP1P11279 417 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 PRPS2P11908 318 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 DPP4P27487 766 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 MAP3K8P41279 467 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 LHX2P50458 406 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 MANFP55145 182 aaKnown RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 B3GALT5-AS1P59052 145 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 MRPS22P82650 360 aaKnown RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 FOXF2Q12947 444 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 CHI3L2Q15782 390 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 DECR1Q16698 335 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 SLC25A35Q3KQZ1 300 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 C6orf136Q5SQH8 315 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 IL23RQ5VWK5 629 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 FIGNL1Q6PIW4 674 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 NUDCD3Q8IVD9 361 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 FADS6Q8N9I5 356 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 OR4K17Q8NGC6 315 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms